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UGID:178062     UniGene Hs.287554     Homo sapiens (human)   ADAMTS20
ADAM metallopeptidase with thrombospondin type 1 motif, 20 (ADAMTS20)

Human protein-coding gene ADAMTS20. Represented by 8 ESTs from 5 cDNA libraries. Corresponds to reference sequence NM_025003.3. [UniGene 178062 - Hs.287554]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079279.3 A disintegrin and metalloproteinase with thrombospondin motifs 20 preproprotein H. sapiens 99.6 1909
NP_803180.3 Adamts20 gene product M. musculus 71.4 1905
XP_002663807.2 PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 9-like D. rerio 52.8 1406
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003906277.1 PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 20, partial P. anubis 95.0 1620
NP_001104009.1 A disintegrin and metalloproteinase with thrombospondin motifs 20 precursor M. mulatta 94.4 1910

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mouth; testis; connective tissue; eye; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q12
UniSTS entry: Chr 12 ADAMTS20__4252
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AJ515153.3 Homo sapiens mRNA for ADAMTS-20 protein, splice variant 1 P
AJ515154.2 Homo sapiens mRNA for ADAMTS-20 protein, splice variant 2 P
AK023228.1 Homo sapiens cDNA FLJ13166 fis, clone NT2RP3003701, weakly similar to F-SPONDIN PRECURSOR P
NM_025003.3 Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 20 (ADAMTS20), mRNA P
AF488804.1 Homo sapiens a disintegrin-like and metalloprotease with thrombospondin type 1 motifs 20 (ADAMTS20) mRNA, complete cds P

EST sequences (8)

CN292892.1 embryonic tissue 5' read P
BE154094.1 mouth
AU132053.1 Clone NT2RP3003701 testis 5' read P
AU153670.1 Clone NT2RP3003701 testis 3' read A
BG200166.1 connective tissue
BG212007.1 connective tissue
BM672383.1 Clone UI-E-CL1-aem-g-12-0-UI eye 3' read P
BM701061.1 Clone UI-E-CL1-aem-g-12-0-UI eye 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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