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UGID:175775     UniGene Hs.280990     Homo sapiens (human)   DEPDC7
DEP domain containing 7 (DEPDC7)

Human protein-coding gene DEPDC7. Represented by 73 ESTs from 35 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 175775 - Hs.280990]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001070710.1 DEPDC7 gene product H. sapiens 100.0 510
XP_001143476.1 PREDICTED: DEP domain-containing protein 7 isoform 1 P. troglodytes 99.6 510
NP_659053.1 Depdc7 gene product M. musculus 89.4 510
NP_001086703.1 DEP domain-containing protein 7 X. laevis 66.7 520
NP_001038734.1 depdc7 gene product D. rerio 57.0 513
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003910115.1 PREDICTED: DEP domain-containing protein 7 P. anubis 98.6 501
XP_540553.3 PREDICTED: DEP domain-containing protein 7 C. lupus familiaris 94.5 509

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; liver; brain; bone marrow; intestine; uncharacterized tissue; mixed; kidney; lymph node; lung; embryonic tissue; bladder; connective tissue; skin; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p13
UniSTS entry: Chr 11 RH99094
UniSTS entry: Chr 11 AB070065
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AJ245600.1 Homo sapiens mRNA for hypothetical protein (TR2/D15 gene) PA
NM_001077242.1 Homo sapiens DEP domain containing 7 (DEPDC7), transcript variant 1, mRNA PA
AF447588.1 Homo sapiens tissue-type testis unknown mRNA PA
NM_139160.2 Homo sapiens DEP domain containing 7 (DEPDC7), transcript variant 2, mRNA PA
BC030970.1 Homo sapiens DEP domain containing 7, mRNA (cDNA clone MGC:32600 IMAGE:4133262), complete cds PA
AK295960.1 Homo sapiens cDNA FLJ60585 complete cds, highly similar to Mus musculus DEP domain containing 7 (Depdc7), mRNA P
AK294934.1 Homo sapiens cDNA FLJ57926 complete cds, highly similar to Mus musculus DEP domain containing 7 (Depdc7), mRNA P
BC011446.1 Homo sapiens DEP domain containing 7, mRNA (cDNA clone IMAGE:4073766), with apparent retained intron PA

EST sequences (10 of 73) [Show all sequences]

AI038194.1 Clone IMAGE:1660098 embryonic tissue 3' read P
BX118181.1 Clone IMAGp998K15617_;_IMAGE:279302 brain P
AI191159.1 Clone IMAGE:1739864 lung 3' read
CB161574.1 Clone L17N670205n1-35-D05 liver 5' read P
AI470591.1 Clone IMAGE:2139439 kidney 3' read A
AI699380.1 Clone IMAGE:2301429 mixed 3' read PA
AI798922.1 Clone IMAGE:2348739 mixed 3' read PA
BX393955.2 Clone CS0DC007YG09 uncharacterized tissue 5' read P
BX327643.2 Clone CS0DC011YK24 uncharacterized tissue 5' read P
BX375298.2 Clone CS0DC011YK24 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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