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UGID:174480     UniGene Hs.277349     Homo sapiens (human)   C11orf16
Chromosome 11 open reading frame 16 (C11orf16)

Human protein-coding gene C11orf16. Represented by 21 ESTs from 16 cDNA libraries. EST representation biased toward trachea; uterine tumor. Corresponds to reference sequence NM_020643.2. [UniGene 174480 - Hs.277349]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065694.2 C11orf16 gene product H. sapiens 100.0 466
NP_001035790.1 BC051019 gene product M. musculus 63.7 401
Other hits (2 of 7) [Show all]SpeciesId(%)Len(aa)
XP_001168491.1 PREDICTED: uncharacterized protein C11orf16 homolog isoform 1 P. troglodytes 97.6 466
XP_003910300.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C11orf16 homolog P. anubis 93.8 466

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: trachea [show more like this]
uterine tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; lung; uncharacterized tissue; brain; trachea; uterus; testis
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.3
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK223377.1 Homo sapiens mRNA for chromosome 11 open reading frame 16 variant, clone: FCC105C01 PA
NM_020643.2 Homo sapiens chromosome 11 open reading frame 16 (C11orf16), mRNA PA
AK074455.1 Homo sapiens cDNA FLJ23875 fis, clone LNG13320 PA
BC027865.1 Homo sapiens chromosome 11 open reading frame 16, mRNA (cDNA clone MGC:34225 IMAGE:5203029), complete cds PA

EST sequences (10 of 21) [Show all sequences]

BX097776.1 Clone IMAGp998M014900_;_IMAGE:1993512 uterus A
AI202945.1 Clone IMAGE:1942548 uncharacterized tissue 3' read A
AI358494.1 Clone IMAGE:1993512 uterus 3' read A
AI688557.1 Clone IMAGE:2330529 mixed 3' read A
AI697899.1 Clone IMAGE:2341484 lung 3' read A
AI799116.1 Clone IMAGE:2349294 mixed 3' read A
BX282735.1 Clone IMAGp998N2211508_;_IMAGE:5203029 mixed P
AI916300.1 Clone IMAGE:2342500 lung 3' read A
CD171707.1 Clone IMAGE:30378749 testis 5' read P
AW293458.1 Clone IMAGE:2727236 uncharacterized tissue 3' read A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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