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UGID:135255     UniGene Hs.26613     Homo sapiens (human)   LARP4
La ribonucleoprotein domain family, member 4 (LARP4)

Human protein-coding gene LARP4. Represented by 342 ESTs from 190 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 135255 - Hs.26613]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_443111.4 LARP4 gene product H. sapiens 100.0 723
NP_001019697.2 Larp4 gene product M. musculus 89.6 718
NP_001091246.1 La ribonucleoprotein domain family, member 4 X. laevis 72.3 732
XP_002666538.2 PREDICTED: la-related protein 4, partial D. rerio 66.7 633
NP_728843.1 CG11505, isoform A D. melanogaster 53.5 299
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_001153518.2 PREDICTED: la-related protein 4 isoform 8 P. troglodytes 99.5 722
XP_001103235.2 PREDICTED: la-related protein 4-like, partial M. mulatta 98.5 460

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; brain; kidney; uncharacterized tissue; mammary gland; testis; skin; lung; lymph node; placenta; intestine; embryonic tissue; uterus; liver; bone; muscle; bladder; eye; pancreas; prostate; pituitary gland; bone marrow; ovary; esophagus; vascular; adrenal gland; mouth; blood; stomach; thyroid; trachea; pharynx; heart; larynx; cervix; lymph; epididymis; nerve; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q13.12
UniSTS entry: Chr 12 A009P30 [Map Viewer]
UniSTS entry: Chr 12 G32742
UniSTS entry: Chr 12 UniSTS:234689
UniSTS entry: SHGC-36450
UniSTS entry: RH81084
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (22)

AL050205.1 Homo sapiens mRNA; cDNA DKFZp586F1323 (from clone DKFZp586F1323) A
AF131755.1 Homo sapiens clone 24885 mRNA sequence A
BX647457.1 Homo sapiens mRNA; cDNA DKFZp313O2111 (from clone DKFZp313O2111) PA
AK125113.1 Homo sapiens cDNA FLJ43123 fis, clone CTONG3003972 P
BC063479.1 Homo sapiens La ribonucleoprotein domain family, member 4, mRNA (cDNA clone MGC:74631 IMAGE:5219803), complete cds PA
NM_199188.2 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 2, mRNA PA
NM_199190.2 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 3, mRNA PA
AF370416.1 Homo sapiens PP13296 mRNA, complete cds PA
CR936626.1 Homo sapiens mRNA; cDNA DKFZp686E039 (from clone DKFZp686E039) PA
AY004310.1 Homo sapiens c-Mpl binding protein mRNA, complete cds PA
NM_052879.4 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 1, mRNA PA
BC017395.1 Homo sapiens La ribonucleoprotein domain family, member 4, mRNA (cDNA clone IMAGE:4049523), partial cds PA
AK055521.1 Homo sapiens cDNA FLJ30959 fis, clone HCASM2000307 P
BC022377.1 Homo sapiens La ribonucleoprotein domain family, member 4, mRNA (cDNA clone IMAGE:4658493), complete cds PA
AK291746.1 Homo sapiens cDNA FLJ77571 complete cds, highly similar to Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 1, mRNA P
BC032444.2 Homo sapiens La ribonucleoprotein domain family, member 4, mRNA (cDNA clone IMAGE:5115593) PA
AL833272.1 Homo sapiens mRNA; cDNA DKFZp451A188 (from clone DKFZp451A188) PA
AL832198.1 Homo sapiens mRNA; cDNA DKFZp686G122 (from clone DKFZp686G122) PA
NM_001170808.1 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 6, mRNA PA
NM_001170804.1 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 5, mRNA PA
NM_001170803.1 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 4, mRNA PA
NR_033200.1 Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 7, non-coding RNA PA

EST sequences (10 of 342) [Show all sequences]

AA910332.1 Clone IMAGE:1520551 kidney 3' read
AI015218.1 Clone IMAGE:1624067 embryonic tissue 3' read
AI082828.1 Clone IMAGE:1662427 mixed 3' read PA
AI094231.1 Clone IMAGE:1689489 mixed 3' read A
CB046704.1 Clone IMAGE:3252857 kidney 3' read A
CB046705.1 Clone IMAGE:3252857 kidney 5' read
AI151188.1 Clone IMAGE:1715278 placenta 3' read A
BX107656.1 Clone IMAGp998C15374_;_IMAGE:196166 mixed P
AI168148.1 Clone IMAGE:1509268 mixed 3' read A
AI254717.1 Clone IMAGE:1962425 intestine 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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