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UGID:135235     UniGene Hs.26506     Homo sapiens (human)   SHKBP1
SH3KBP1 binding protein 1 (SHKBP1)

Human protein-coding gene SHKBP1. Represented by 591 ESTs from 229 cDNA libraries. Corresponds to reference sequence NM_138392.3. [UniGene 135235 - Hs.26506]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612401.2 SHKBP1 gene product H. sapiens 100.0 706
XP_512668.3 PREDICTED: SH3KBP1-binding protein 1 isoform 7 P. troglodytes 99.8 686
XP_003915598.1 PREDICTED: SH3KBP1-binding protein 1 P. anubis 99.7 706
NP_619617.2 Shkbp1 gene product M. musculus 97.4 703
NP_001088174.1 SH3KBP1 binding protein 1 X. laevis 87.6 517
XP_001920935.3 PREDICTED: SH3KBP1-binding protein 1-like D. rerio 83.5 708
NP_649952.1 CG9467 D. melanogaster 65.6 662
NP_505177.1 Protein T23B12.6 C. elegans 59.2 625
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_002801290.1 PREDICTED: SH3KBP1-binding protein 1-like isoform 2 M. mulatta 99.3 607
XP_003362363.1 PREDICTED: LOW QUALITY PROTEIN: SH3KBP1-binding protein 1-like E. caballus 98.9 703

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; blood; testis; pharynx; bone marrow; mammary gland; salivary gland; skin; mixed; adipose tissue; thyroid; kidney; spleen; uterus; mouth; tonsil; pancreas; intestine; umbilical cord; embryonic tissue; placenta; trachea; epididymis; prostate; ascites; lymph; ovary; vascular; connective tissue; lung; eye; muscle; cervix; liver; thymus; lymph node; bone; esophagus; adrenal gland; bladder; stomach; heart; larynx; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.2
UniSTS entry: Chr 19 RH94117
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK123695.1 Homo sapiens cDNA FLJ41701 fis, clone HCHON2006250, highly similar to Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA P
AY007117.1 Homo sapiens clone CDABP0005 mRNA sequence PA
BC007653.1 Homo sapiens SH3KBP1 binding protein 1, mRNA (cDNA clone IMAGE:3610013), partial cds PA
AF258553.1 Homo sapiens PP203 mRNA, complete cds PA
AK312748.1 Homo sapiens cDNA, FLJ93157, highly similar to Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA P
BC022855.1 Homo sapiens SH3KBP1 binding protein 1, mRNA (cDNA clone MGC:22658 IMAGE:4102901), complete cds PA
NM_138392.3 Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA PA
AK300819.1 Homo sapiens cDNA FLJ53408 complete cds, highly similar to Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA P
AK300808.1 Homo sapiens cDNA FLJ55912 complete cds, highly similar to Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA PA
AK297006.1 Homo sapiens cDNA FLJ56104 complete cds, highly similar to Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA PA
AK075057.1 Homo sapiens cDNA FLJ90576 fis, clone OVARC1001991, weakly similar to VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV3.3 P

EST sequences (10 of 591) [Show all sequences]

AA991561.1 Clone IMAGE:1609703 mammary gland 3' read A
AA928027.1 Clone IMAGE:1541957 mixed 3' read A
T27113.1 Clone LLAB295C05 brain 5' read P
CB044052.1 Clone IMAGE:3217523 intestine 5' read P
CB108115.1 Clone L3SNU475-25-C10 liver 5' read P
CB138863.1 Clone L5HLK1-36-F08 liver 5' read P
CB152174.1 Clone B1T694954-24-C09 brain 5' read P
CB153718.1 Clone B1T694954-25-A10 brain 5' read P
CB150332.1 Clone C1SNU17s1-2-F09 cervix 5' read P
CB120743.1 Clone L11SNU354-1-F04 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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