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UGID:167813     UniGene Hs.240053     Homo sapiens (human)   GSG1
Germ cell associated 1 (GSG1)

Human protein-coding gene GSG1. Represented by 259 ESTs from 33 cDNA libraries. EST representation biased toward retinoblastoma. Corresponds to 7 reference sequences (different isoforms). [UniGene 167813 - Hs.240053]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001074024.1 GSG1 gene product H. sapiens 100.0 361
NP_001074021.1 germ cell-specific gene 1 protein isoform a M. musculus 77.2 367
NP_001035065.1 gsg1l gene product D. rerio 57.2 296
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001156010.1 PREDICTED: uncharacterized protein LOC465302 isoform 15 P. troglodytes 99.5 361
XP_003906078.1 PREDICTED: germ cell-specific gene 1 protein isoform 1 P. anubis 95.6 362

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: retinoblastoma [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; eye; brain; mixed; pineal gland; uncharacterized tissue; embryonic tissue; placenta; muscle; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p13.1
UniSTS entry: Chr 12 GSG1__7554
UniSTS entry: Chr 12 RH103531
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AY358513.1 Homo sapiens clone DNA59488 GSG1 (UNQ709) mRNA, complete cds P
BC112896.1 Homo sapiens germ cell associated 1, mRNA (cDNA clone MGC:111023 IMAGE:6145063), complete cds PA
BC001796.1 Homo sapiens germ cell associated 1, mRNA (cDNA clone MGC:3146 IMAGE:3353821), complete cds PA
NM_031289.3 Homo sapiens germ cell associated 1 (GSG1), transcript variant 1, mRNA PA
AK027894.1 Homo sapiens cDNA FLJ14988 fis, clone Y79AA1001323, moderately similar to Mus musculus mRNA for GSG1 P
NM_001080555.2 Homo sapiens germ cell associated 1 (GSG1), transcript variant 4, mRNA PA
NM_001080554.2 Homo sapiens germ cell associated 1 (GSG1), transcript variant 3, mRNA PA
AK058045.1 Homo sapiens cDNA FLJ25316 fis, clone TST00188 P
BC033854.1 Homo sapiens germ cell associated 1, mRNA (cDNA clone MGC:44923 IMAGE:5164943), complete cds PA
AK075322.1 Homo sapiens cDNA FLJ90841 fis, clone Y79AA1002373, highly similar to Germ cell associated 1 P
AK075311.1 Homo sapiens cDNA FLJ90830 fis, clone Y79AA1001793, moderately similar to Mus musculus mRNA for GSG1 P
AK075288.1 Homo sapiens cDNA FLJ90807 fis, clone Y79AA1000776 P
AB593020.1 Homo sapiens GSG1 mRNA for germ cell-specific gene 1 protein, complete cds, clone: HP03371-RBd97G03 PA
AB593019.1 Homo sapiens GSG1 mRNA for germ cell-specific gene 1 protein, complete cds, clone: HP03371-RBd53F10 P
NM_001206845.1 Homo sapiens germ cell associated 1 (GSG1), transcript variant 7, mRNA PA
NM_001206843.1 Homo sapiens germ cell associated 1 (GSG1), transcript variant 6, mRNA PA
NM_001206842.1 Homo sapiens germ cell associated 1 (GSG1), transcript variant 5, mRNA PA
NM_153823.3 Homo sapiens germ cell associated 1 (GSG1), transcript variant 2, mRNA PA

EST sequences (10 of 259) [Show all sequences]

AA969682.1 Clone IMAGE:1579215 mixed 3' read
AA994466.1 Clone IMAGE:1628597 mixed 3' read PA
AI016246.1 Clone IMAGE:1641185 testis 3' read PA
AI017555.1 Clone IMAGE:1628267 mixed 3' read PA
AI024850.1 Clone IMAGE:1639707 testis 3' read PA
AI024872.1 Clone IMAGE:1639731 testis 3' read PA
AI028543.1 Clone IMAGE:1645564 testis 3' read A
AA887084.1 Clone IMAGE:1476405 uncharacterized tissue 3' read P
BX117930.1 Clone IMAGp998M04924_;_IMAGE:397227 pineal gland P
BX091485.1 Clone IMAGp998K054175_;_IMAGE:1645564 testis


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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