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UGID:167542     UniGene Hs.236516     Homo sapiens (human)   CLEC4E
C-type lectin domain family 4, member E (CLEC4E)

Human protein-coding gene CLEC4E. Represented by 46 ESTs from 28 cDNA libraries. EST representation biased toward neonate. Corresponds to reference sequence NM_014358.2. [UniGene 167542 - Hs.236516]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055173.1 CLEC4E gene product H. sapiens 100.0 218
XP_001135285.1 PREDICTED: C-type lectin domain family 4 member E isoform 2 P. troglodytes 99.5 218
NP_064332.1 Clec4e gene product M. musculus 71.0 213
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_001118423.1 PREDICTED: c-type lectin domain family 4 member E M. mulatta 90.0 218
XP_003905987.1 PREDICTED: C-type lectin domain family 4 member E P. anubis 89.0 218

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: neonate [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: blood; uncharacterized tissue; lung; kidney; amniotic fluid; intestine; spleen; brain; connective tissue; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p13.31
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AB024718.1 Homo sapiens mRNA for macrophage C-type lectin Mincle, complete cds P
AY358499.1 Homo sapiens clone DNA35668 CLECSF9 (UNQ218) mRNA, complete cds PA
NM_014358.2 Homo sapiens C-type lectin domain family 4, member E (CLEC4E), mRNA P
BC000715.2 Homo sapiens C-type lectin domain family 4, member E, mRNA (cDNA clone MGC:1246 IMAGE:3507103), complete cds PA
AK312671.1 Homo sapiens cDNA, FLJ93064, Homo sapiens C-type (calcium dependent, carbohydrate-recognitiondomain) lectin, superfamily member 9 (CLECSF9), mRNA PA

EST sequences (10 of 46) [Show all sequences]

AI761169.1 Clone IMAGE:2394461 intestine 3' read PA
AI825483.1 Clone IMAGE:2311326 uncharacterized tissue 3' read A
CB528932.1 Clone UI-H-FT2-bje-h-23-0-UI lung 3' read PA
AI968491.1 Clone IMAGE:2514686 uncharacterized tissue 3' read PA
AI990505.1 Clone IMAGE:2499672 uncharacterized tissue 3' read PA
CD364806.1 Clone UI-H-FT2-bjm-b-10-0-UI lung 3' read PA
CD368203.1 Clone UI-H-FT1-bjv-b-17-0-UI lung 3' read PA
CD369372.1 Clone UI-H-FT1-bju-o-04-0-UI lung 3' read PA
CD742945.1 Clone UI-H-FT1-bjw-a-09-0-UI lung 3' read PA
AW236598.1 Clone IMAGE:2687444 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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