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UGID:167288     UniGene Hs.233404     Homo sapiens (human)   ABLIM2
Actin binding LIM protein family, member 2 (ABLIM2)

Human protein-coding gene ABLIM2. Represented by 150 ESTs from 81 cDNA libraries. Corresponds to 7 reference sequences (different isoforms). [UniGene 167288 - Hs.233404]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001123555.1 ABLIM2 gene product H. sapiens 100.0 644
XP_003310295.1 PREDICTED: actin-binding LIM protein 2 P. troglodytes 99.7 649
NP_001171167.1 Ablim2 gene product M. musculus 90.5 663
NP_001087805.1 actin binding LIM protein family, member 2 X. laevis 81.7 606
XP_696875.5 PREDICTED: actin-binding LIM protein 2-like D. rerio 73.6 609
NP_731392.2 Unc-115b, isoform B D. melanogaster 47.0 287
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_003898484.1 PREDICTED: actin-binding LIM protein 2-like, partial P. anubis 99.3 295
XP_002804040.1 PREDICTED: actin-binding LIM protein 2-like isoform 1 M. mulatta 99.2 644

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; lung; mixed; vascular; uncharacterized tissue; mouth; pharynx; testis; thyroid; cervix; ovary; prostate; spleen; heart; eye; intestine; mammary gland; muscle; uterus; embryonic tissue; kidney; connective tissue; nerve; peritoneum
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p16.1
UniSTS entry: Chr 4 SHGC-59833
UniSTS entry: Chr 4 SHGC-67378
UniSTS entry: Chr 4 PMC134465P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BC067214.1 Homo sapiens actin binding LIM protein family, member 2, mRNA (cDNA clone IMAGE:6188753), partial cds PA
AJ748601.1 Homo sapiens mRNA for actin binding LIM protein family member 2 (ABLIM2 gene), isoform a P
AJ748600.1 Homo sapiens mRNA for actin binding LIM protein family member 2 (ABLIM2 gene), isoform b P
DQ413177.1 Homo sapiens actin-binding LIM protein 2 splice variant 2 (ABLIM2) mRNA, complete cds, alternatively spliced P
DQ413176.1 Homo sapiens actin-binding LIM protein 2 splice variant 1 (ABLIM2) mRNA, complete cds, alternatively spliced P
BC122567.1 Homo sapiens actin binding LIM protein family, member 2, mRNA (cDNA clone MGC:141918 IMAGE:40085570), complete cds P
AB058711.1 Homo sapiens mRNA for KIAA1808 protein, partial cds P
AK097003.1 Homo sapiens cDNA FLJ39684 fis, clone SMINT2010326
AK094798.1 Homo sapiens cDNA FLJ37479 fis, clone BRAWH2013748, moderately similar to Actin binding LIM protein 1 P
AK094754.1 Homo sapiens cDNA FLJ37435 fis, clone BRAWH2002811, moderately similar to Homo sapiens actin-binding double-zinc-finger protein (abLIM) mRNA PA
NM_001130088.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 7, mRNA PA
NM_001130087.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 5, mRNA PA
NM_001130086.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 4, mRNA PA
NM_001130085.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 3, mRNA PA
NM_001130084.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 2, mRNA PA
NM_001130083.1 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 1, mRNA PA
AJ431609.1 Homo sapiens mRNA adjacent to 3' end of integrated HPV16 (INT259)
AK301060.1 Homo sapiens cDNA FLJ52773 complete cds, highly similar to Actin-binding LIM protein 2 P
NM_032432.4 Homo sapiens actin binding LIM protein family, member 2 (ABLIM2), transcript variant 6, mRNA PA

EST sequences (10 of 150) [Show all sequences]

AA996312.1 Clone IMAGE:1605837 kidney 3' read A
AI074682.1 Clone IMAGE:1662891 mixed 3' read A
AI085846.1 Clone IMAGE:1659495 embryonic tissue 3' read
BX099408.1 Clone IMAGp998C24604_;_IMAGE:274127 mixed
CB152189.1 Clone B1T694954-24-E03 brain 5' read P
CB177565.1 Clone IMAGE:6553261 pancreas 5' read
CB177979.1 Clone IMAGE:6553261 pancreas 3' read
AI240129.1 Clone IMAGE:1846570 mixed 3' read A
AI278717.1 Clone IMAGE:1873412 intestine 3' read
R48180.1 Clone IMAGE:153763 mammary gland 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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