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UGID:134603     UniGene Hs.23111     Homo sapiens (human)   FARSA
Phenylalanyl-tRNA synthetase, alpha subunit (FARSA)

Human protein-coding gene FARSA. Represented by 694 ESTs from 270 cDNA libraries. Corresponds to reference sequence NM_004461.2. [UniGene 134603 - Hs.23111]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001233393.1 FARSA gene product P. troglodytes 100.0 507
NP_004452.1 FARSA gene product H. sapiens 100.0 507
XP_001110025.1 PREDICTED: phenylalanyl-tRNA synthetase alpha chain-like isoform 6 M. mulatta 99.8 507
XP_003915046.1 PREDICTED: phenylalanine--tRNA ligase alpha subunit isoform 1 P. anubis 99.8 507
NP_079924.2 Farsa gene product M. musculus 96.5 507
NP_001038760.2 farsa gene product D. rerio 85.9 496
NP_001087130.1 phenylalanine--tRNA ligase alpha subunit A X. laevis 83.3 497
NP_572448.1 CG2263 D. melanogaster 75.0 492
NP_871804.1 Protein FARS-1, isoform b C. elegans 70.1 491
NP_001190964.1 phenylalanyl-tRNA synthetase alpha chain A. thaliana 69.2 481
XP_001694933.1 predicted protein C. reinhardtii 68.2 491
XP_957081.1 phenylalanyl-tRNA synthetase alpha chain N. crassa 63.0 450
NP_116631.1 phenylalanine--tRNA ligase subunit alpha S. cerevisiae 61.3 470
Other hits (2 of 58) [Show all]SpeciesId(%)Len(aa)
XP_003123385.1 PREDICTED: phenylalanyl-tRNA synthetase alpha chain-like S. scrofa 97.6 507
XP_004008536.1 PREDICTED: phenylalanine--tRNA ligase alpha subunit isoform 1 O. aries 97.4 507

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; prostate; intestine; lung; skin; liver; embryonic tissue; placenta; mixed; uterus; blood; kidney; eye; testis; cervix; bone marrow; larynx; bladder; mammary gland; muscle; adrenal gland; stomach; connective tissue; spleen; thyroid; thymus; salivary gland; tonsil; ascites; lymph; heart; lymph node; ovary; vascular; esophagus; ganglia; nerve; bone; umbilical cord; mouth; pancreas; pharynx; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.2
UniSTS entry: Chr 19 RH98885
UniSTS entry: Chr 19 RH46987 [Map Viewer]
UniSTS entry: Chr 19 RH70803 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BC043565.1 Homo sapiens phenylalanyl-tRNA synthetase, alpha subunit, mRNA (cDNA clone IMAGE:5214476), partial cds PA
BT007198.1 Homo sapiens phenylalanine-tRNA synthetase-like mRNA, complete cds P
AF042347.1 Homo sapiens putative phenylalanyl-tRNA synthetase alpha-subunit mRNA, complete cds P
AK130195.1 Homo sapiens cDNA FLJ26685 fis, clone MPG06479, highly similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) P
NM_004461.2 Homo sapiens phenylalanyl-tRNA synthetase, alpha subunit (FARSA), mRNA P
CR456740.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0511D for gene FARSLA, phenylalanine-tRNA synthetase-like, alpha subunit; complete cds, incl. stopcodon P
D84471.1 Homo sapiens mRNA for phenylalanyl tRNA synthetase beta subunit, complete cds P
BC006495.2 Homo sapiens phenylalanyl-tRNA synthetase, alpha subunit, mRNA (cDNA clone MGC:1507 IMAGE:2823551), complete cds PA
AK092093.1 Homo sapiens cDNA FLJ34774 fis, clone NT2NE2003309, highly similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) P
AK304587.1 Homo sapiens cDNA FLJ50378 complete cds, highly similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) PA
BC035438.1 Homo sapiens phenylalanyl-tRNA synthetase, alpha subunit, mRNA (cDNA clone IMAGE:4747714) PA
U07424.1 Human putative tRNA synthetase-like protein mRNA, complete cds P

EST sequences (10 of 694) [Show all sequences]

R21065.1 Clone IMAGE:36319 brain 5' read
AI208141.1 Clone IMAGE:1836917 testis 3' read A
R28076.1 Clone IMAGE:134738 placenta 5' read P
R28291.1 Clone IMAGE:134738 placenta 3' read A
CB106736.1 Clone L3SNU475-10-A11 liver 5' read P
CB152678.1 Clone B1T694954-19-D02 brain 5' read P
CB152920.1 Clone B1T694954-16-D10 brain 5' read
CB155160.1 Clone B2N807043-8-F05 brain 5' read P
CB155181.1 Clone B2N807043-13-A11 brain 5' read P
CB122420.1 Clone L10ChoCK0-21-D08 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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