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UGID:134543     UniGene Hs.22857     Homo sapiens (human)   CHORDC1
Cysteine and histidine-rich domain (CHORD) containing 1 (CHORDC1)

Human protein-coding gene CHORDC1. Represented by 360 ESTs from 202 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 134543 - Hs.22857]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001233351.1 CHORDC1 gene product P. troglodytes 100.0 331
NP_036256.2 CHORDC1 gene product H. sapiens 100.0 331
NP_080120.1 Chordc1 gene product M. musculus 98.5 328
NP_001084590.1 cysteine and histidine-rich domain-containing protein 1 X. laevis 83.7 331
NP_956633.1 chordc1 gene product D. rerio 78.5 340
NP_651226.1 CHORD D. melanogaster 47.1 297
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001083485.2 PREDICTED: cysteine and histidine-rich domain-containing protein 1 isoform 4 M. mulatta 99.1 331
NP_001039377.1 CHORDC1 gene product B. taurus 98.2 331

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; embryonic tissue; uterus; heart; adrenal gland; ear; cervix; mouth; testis; connective tissue; bladder; bone marrow; vascular; esophagus; thyroid; stomach; ovary; thymus; pancreas; lung; liver; blood; intestine; skin; placenta; kidney; mixed; bone; prostate; muscle; eye; lymph node; mammary gland; trachea; ascites; spleen; pharynx; nerve; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q14.3
UniSTS entry: Chr 14 RH122818
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BX537692.1 Homo sapiens mRNA; cDNA DKFZp686F06111 (from clone DKFZp686F06111) A
NM_012124.2 Homo sapiens cysteine and histidine-rich domain (CHORD) containing 1 (CHORDC1), transcript variant 1, mRNA PA
BC072461.1 Homo sapiens cysteine and histidine-rich domain (CHORD)-containing 1, mRNA (cDNA clone MGC:90311 IMAGE:6471725), complete cds PA
AF192466.1 Homo sapiens CHORD containing protein-1 (CHP1) mRNA, complete cds PA
AF123249.1 Homo sapiens chymotrypsin-like protein mRNA, complete cds P
AK225565.1 Homo sapiens mRNA for cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 variant, clone: LNG00337 P
AK225365.1 Homo sapiens mRNA for cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 variant, clone: HEP15928 PA
BC017789.1 Homo sapiens cysteine and histidine-rich domain (CHORD)-containing 1, mRNA (cDNA clone IMAGE:4286875), complete cds PA
AK290231.1 Homo sapiens cDNA FLJ77875 complete cds, highly similar to Homo sapiens CHORD containing protein-1 (CHP1) mRNA P
AK312663.1 Homo sapiens cDNA, FLJ93053, highly similar to Homo sapiens cysteine and histidine-rich domain (CHORD)-containing 1 (CHORDC1), mRNA P
BC002339.2 Homo sapiens cDNA clone IMAGE:2820113, containing frame-shift errors PA
NM_001144073.1 Homo sapiens cysteine and histidine-rich domain (CHORD) containing 1 (CHORDC1), transcript variant 2, mRNA PA

EST sequences (10 of 360) [Show all sequences]

AI015720.1 Clone IMAGE:1622194 embryonic tissue 3' read A
R19898.1 Clone IMAGE:35011 brain 5' read
CB044965.1 Clone IMAGE:3218086 intestine 5' read P
BX113859.1 Clone IMAGp998B09562_;_IMAGE:257960 placenta
CB118348.1 Clone L8SCK0-18-A03 liver 5' read A
CB119466.1 Clone L8SCK0-25-C09 liver 5' read A
CB147762.1 Clone L9SNU354-14-C04 liver 5' read
AI241037.1 Clone IMAGE:1867246 kidney 3' read A
AI243826.1 Clone IMAGE:1853680 mixed 3' read
AI435096.1 Clone IMAGE:2126410 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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