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UGID:131182     UniGene Hs.2233     Homo sapiens (human)   CSF3
Colony stimulating factor 3 (granulocyte) (CSF3)

Human protein-coding gene CSF3. Represented by 54 ESTs from 23 cDNA libraries. EST representation biased toward adult. Corresponds to 5 reference sequences (different isoforms). [UniGene 131182 - Hs.2233]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_000750.1 CSF3 gene product H. sapiens 100.0 206
NP_034101.1 Csf3 gene product M. musculus 76.4 207
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_003315506.1 PREDICTED: granulocyte colony-stimulating factor-like isoform 2 P. troglodytes 99.0 206
XP_003913006.1 PREDICTED: granulocyte colony-stimulating factor P. anubis 98.0 203

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; skin; mixed; cervix; uncharacterized tissue; intestine; uterus; muscle; eye; brain; ovary; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q11.2-q12
UniSTS entry: Chr 17 RH18072 [Map Viewer]
UniSTS entry: Chr 17 D17S2007 [Map Viewer]
UniSTS entry: Chr 17 G60027
UniSTS entry: Chr 17 GDB:178573
UniSTS entry: Chr 17 PMC316641P2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

M17706.1 Human granulocyte colony stimulating factor mRNA, complete cds P
NM_000759.3 Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 1, mRNA PA
CR541891.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0733D for gene CSF3, colony stimulating factor 3 (granulocyte); complete cds, without stopcodon P
AB102881.1 Homo sapiens CSF3 mRNA for colony stimulating factor 3 nirs variant 1, complete cds
X03438.1 Human mRNA for granulocyte colony-stimulating factor (G-CSF) P
X03655.1 Human mRNA for granulocyte colony-stimulating factor (G-CSF) (pBRV-2) P
AK290247.1 Homo sapiens cDNA FLJ76606 complete cds, highly similar to Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 3, mRNA P
AK313509.1 Homo sapiens cDNA, FLJ94067, Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3),transcript variant 2, mRNA P
BC033245.1 Homo sapiens colony stimulating factor 3 (granulocyte), mRNA (cDNA clone MGC:45931 IMAGE:5434958), complete cds PA
AK298116.1 Homo sapiens cDNA FLJ52903 complete cds, moderately similar to Granulocyte colony-stimulating factor precursor P
NM_001178147.1 Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 4, mRNA PA
HM132049.1 Homo sapiens clone shicr89 granulocyte colony-stimulating factor (CSF3) mRNA, partial cds, alternatively spliced P
NR_033662.1 Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 5, non-coding RNA PA
NM_172220.2 Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 3, mRNA PA
NM_172219.2 Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 2, mRNA PA

EST sequences (10 of 54) [Show all sequences]

AI074784.1 Clone IMAGE:1667001 skin 3' read A
BX108471.1 Clone IMAGp998P215325_;_IMAGE:2156804 intestine A
CB136760.1 Clone L5HLK1-42-H10 liver 5' read P
CB127794.1 Clone C1SNU17-10-C09 cervix 5' read P
CB126975.1 Clone C1SNU17-14-A07 cervix 5' read P
AI476473.1 Clone IMAGE:2156804 intestine 3' read A
AI963704.1 Clone IMAGE:2492509 uterus 3' read A
CD364767.1 Clone UI-H-FT2-bjm-l-01-0-UI lung 3' read A
CD370607.1 Clone UI-H-FT1-bkc-n-13-0-UI lung 3' read A
CD370654.1 Clone UI-H-FT1-bkc-h-10-0-UI lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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