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UGID:131168     UniGene Hs.2164     Homo sapiens (human)   PPBP
Pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) (PPBP)

Human protein-coding gene PPBP. Represented by 50 ESTs from 25 cDNA libraries. Corresponds to reference sequence NM_002704.3. [UniGene 131168 - Hs.2164]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001155921.1 PREDICTED: platelet basic protein P. troglodytes 100.0 127
NP_002695.1 PPBP gene product H. sapiens 100.0 127
Other hits (SpeciesId(%)Len(aa)
XP_003898816.1 PREDICTED: platelet basic protein P. anubis 96.1 127
XP_001102705.1 PREDICTED: platelet basic protein M. mulatta 95.3 127

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; placenta; blood; liver; uncharacterized tissue; pancreas; bone marrow; intestine; heart; lung; prostate; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q12-q13
UniSTS entry: Chr 4 SHGC4-129 [Map Viewer]
UniSTS entry: Chr 4 SHGC-12412
UniSTS entry: Chr 4 SHGC-50812
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_002704.3 Homo sapiens pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) (PPBP), mRNA PA
CR456805.1 Homo sapiens full open reading frame cDNA clone RZPDo834A1015D for gene PPBP, pro-platelet basic protein (chemokine (C-X-C motif) ligand 7); complete cds, incl. stopcodon P
M54995.1 Human connective tissue activation peptide III mRNA, complete cds P
AK312166.1 Homo sapiens cDNA, FLJ92452, Homo sapiens pro-platelet basic protein (chemokine (C-X-C motif)ligand 7) (PPBP), mRNA P
BC028217.1 Homo sapiens pro-platelet basic protein (chemokine (C-X-C motif) ligand 7), mRNA (cDNA clone MGC:40008 IMAGE:5214257), complete cds PA

EST sequences (10 of 50) [Show all sequences]

AI128304.1 Clone IMAGE:1714016 placenta 3' read A
CB112845.1 Clone L6ChoCK0-9-B11 liver 5' read P
AI581312.1 Clone IMAGE:2045691 lung 3' read A
AI800574.1 Clone IMAGE:2364856 mixed 3' read A
BX281396.1 Clone IMAGp998B1811538_;_IMAGE:5214257 blood P
BX380219.2 Clone CS0DI044YN22 placenta 5' read P
BX429982.2 Clone CS0DM002YI05 liver 5' read
R62614.1 Clone IMAGE:139013 placenta 3' read
R62664.1 Clone IMAGE:139013 placenta 5' read
R64130.1 Clone IMAGE:139637 placenta 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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