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UGID:163973     UniGene Hs.209983     Homo sapiens (human)   STMN1
Stathmin 1 (STMN1)

Human protein-coding gene STMN1. Represented by 2281 ESTs from 434 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 163973 - Hs.209983]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001114361.2 PREDICTED: stathmin-like isoform 1 M. mulatta 100.0 203
XP_003891411.1 PREDICTED: stathmin-like P. anubis 100.0 203
NP_001138926.1 STMN1 gene product H. sapiens 100.0 173
NP_058862.1 Stmn1 gene product R. norvegicus 100.0 148
NP_001168806.1 uncharacterized protein LOC100382607 Z. mays 100.0 148
XP_001136688.1 PREDICTED: uncharacterized protein LOC456650 isoform 2 P. troglodytes 100.0 148
XP_535349.1 PREDICTED: stathmin isoform 1 C. lupus familiaris 100.0 148
XP_001504164.1 PREDICTED: stathmin-like E. caballus 100.0 148
NP_001009582.1 STMN1 gene product S. scrofa 100.0 148
NP_001029962.1 STMN1 gene product B. taurus 100.0 148
XP_004005152.1 PREDICTED: stathmin O. aries 100.0 148
XP_002710535.1 PREDICTED: stathmin 1-like O. cuniculus 100.0 148
NP_062615.1 Stmn1 gene product M. musculus 99.3 148
NP_001080672.1 stathmin 1 X. laevis 89.7 144
NP_001017850.1 stmn1b gene product D. rerio 81.2 148
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_001363136.1 PREDICTED: stathmin-like M. domestica 99.3 148
XP_003431428.1 PREDICTED: stathmin-like isoform 2 O. anatinus 98.0 148

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uterus; skin; eye; embryonic tissue; thymus; uncharacterized tissue; lung; mixed; liver; blood; placenta; heart; intestine; bone marrow; bladder; pancreas; bone; mammary gland; prostate; kidney; salivary gland; ovary; adrenal gland; mouth; pituitary gland; lymph; pineal gland; muscle; pharynx; stomach; lymph node; tonsil; ascites; connective tissue; cervix; epididymis; nerve; ear; vascular; spinal cord; spleen; umbilical cord; parathyroid; esophagus; trachea; amniotic fluid; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.11
UniSTS entry: Chr 1 STMN1
UniSTS entry: Chr 1 A006T10
UniSTS entry: Chr 1 GDB:549193
UniSTS entry: Chr 1 D1S2416 [Map Viewer]
UniSTS entry: Chr 1 RH70969
UniSTS entry: Chr 1 D1S3529
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 2 G20530
UniSTS entry: Chr 2 A005V12
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

BX647885.1 Homo sapiens mRNA; cDNA DKFZp686C18102 (from clone DKFZp686C18102) PA
NM_005563.3 Homo sapiens stathmin 1 (STMN1), transcript variant 3, mRNA PA
NM_203401.1 Homo sapiens stathmin 1 (STMN1), transcript variant 1, mRNA PA
NM_203399.1 Homo sapiens stathmin 1 (STMN1), transcript variant 2, mRNA PA
BC082228.1 Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone MGC:99593 IMAGE:2822803), complete cds PA
AB209282.1 Homo sapiens mRNA for stathmin 1 variant protein P
J04991.1 Human p18 protein mRNA, complete cds P
BC114502.1 Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone MGC:138870 IMAGE:40083868), complete cds
BC114443.1 Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone MGC:138869 IMAGE:40083863), complete cds
BC014353.1 Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone MGC:24199 IMAGE:3683516), complete cds PA
AK056768.1 Homo sapiens cDNA FLJ32206 fis, clone PLACE6003109 A
AK054594.1 Homo sapiens cDNA FLJ30032 fis, clone 3NB692001366, highly similar to STATHMIN P
AK311801.1 Homo sapiens cDNA, FLJ92062, Homo sapiens stathmin 1/oncoprotein 18 (STMN1), mRNA P
AB451448.1 Homo sapiens STMN1 mRNA for stathmin 1, partial cds, clone: FLJ08188AAAF P
AB451319.1 Homo sapiens STMN1 mRNA for stathmin 1, complete cds, clone: FLJ08188AAAN P
BC028398.1 Homo sapiens chromosome 1 open reading frame 215, mRNA (cDNA clone IMAGE:4801127)
AK303692.1 Homo sapiens cDNA FLJ57769 complete cds, highly similar to Stathmin P
NM_001145454.1 Homo sapiens stathmin 1 (STMN1), transcript variant 4, mRNA P
Z11566.1 H.sapiens mRNA for Pr22 protein P
X53305.1 H.sapiens mRNA for stathmin P
BC023313.1 Homo sapiens stathmin 1/oncoprotein 18, mRNA (cDNA clone IMAGE:4939590), with apparent retained intron PA

EST sequences (10 of 2281) [Show all sequences]

AA970349.1 Clone IMAGE:1576382 intestine 3' read A
R15905.1 Clone IMAGE:53227 brain 3' read A
R15906.1 Clone IMAGE:53227 brain 5' read P
AA977958.1 Clone IMAGE:1592331 kidney 3' read A
AA978164.1 Clone IMAGE:1273831 bone
AA983968.1 Clone IMAGE:1601082 uncharacterized tissue 3' read A
AA984210.1 Clone IMAGE:1629624 brain 3' read P
AA984673.1 Clone IMAGE:1630226 brain 3' read P
AA987849.1 Clone IMAGE:1593954 kidney 3' read A
AA988718.1 Clone IMAGE:1594049 kidney 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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