NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:162928     UniGene Hs.203717     Homo sapiens (human)   FN1
Fibronectin 1 (FN1)

Human protein-coding gene FN1. Represented by 7363 ESTs from 834 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 162928 - Hs.203717]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_516072.3 PREDICTED: fibronectin isoform 4 P. troglodytes 100.0 2476
NP_997647.1 FN1 gene product H. sapiens 100.0 2476
XP_003907965.1 PREDICTED: fibronectin-like P. anubis 99.8 1461
XP_001083548.2 PREDICTED: fibronectin M. mulatta 99.7 2476
NP_034363.1 Fn1 gene product M. musculus 98.3 2476
NP_001081270.1 fibronectin precursor X. laevis 80.0 2480
NP_571595.1 fn1 gene product D. rerio 69.8 2476
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_536059.3 PREDICTED: fibronectin C. lupus familiaris 98.3 2428
XP_003133690.1 PREDICTED: fibronectin isoform 2 S. scrofa 97.8 2477

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; connective tissue; embryonic tissue; lung; bone; brain; muscle; skin; bone marrow; amniotic fluid; liver; uncharacterized tissue; kidney; intestine; mammary gland; mixed; vascular; pancreas; uterus; eye; mouth; stomach; heart; thyroid; larynx; thymus; epididymis; testis; umbilical cord; trachea; bladder; ovary; prostate; ear; nerve; blood; esophagus; pharynx; adipose tissue; cervix; ganglia; lymph node; spinal cord; pituitary gland; spleen; salivary gland; adrenal gland; lymph; tonsil
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q34
UniSTS entry: Chr 2 GDB:181245
UniSTS entry: Chr 2 D2S2635
UniSTS entry: Chr 2 RH98726
UniSTS entry: Chr 2 PMC115222P2
UniSTS entry: Chr 2 RH78451
UniSTS entry: Chr 2 GDB:344700
UniSTS entry: Chr 2 FN1
UniSTS entry: Chr 2 FN1
UniSTS entry: Chr 2 WIAF-2175
UniSTS entry: D2S2619
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (75)

U42456.1 Human fibronectin (FN1) mRNA, C-terminus, partial cds P
BT006856.1 Homo sapiens fibronectin 1 mRNA, complete cds P
BX538045.1 Homo sapiens mRNA; cDNA DKFZp686B18150 (from clone DKFZp686B18150) PA
BX538018.1 Homo sapiens mRNA; cDNA DKFZp686E169 (from clone DKFZp686E169) PA
BX538017.1 Homo sapiens mRNA; cDNA DKFZp686O016 (from clone DKFZp686O016) P
BX537590.1 Homo sapiens mRNA; cDNA DKFZp686I155 (from clone DKFZp686I155) PA
BX649182.1 Homo sapiens mRNA; cDNA DKFZp686K139 (from clone DKFZp686K139); complete cds P
BX640999.1 Homo sapiens mRNA; cDNA DKFZp686O12165 (from clone DKFZp686O12165); complete cds PA
BX640920.1 Homo sapiens mRNA; cDNA DKFZp686O22169 (from clone DKFZp686O22169) PA
BX640875.1 Homo sapiens mRNA; cDNA DKFZp686O1166 (from clone DKFZp686O1166) PA
BX640803.1 Homo sapiens mRNA; cDNA DKFZp686O1570 (from clone DKFZp686O1570) PA
BX640802.1 Homo sapiens mRNA; cDNA DKFZp686F219 (from clone DKFZp686F219); complete cds P
BX640731.1 Homo sapiens mRNA; cDNA DKFZp686M2451 (from clone DKFZp686M2451); complete cds PA
BX640638.1 Homo sapiens mRNA; cDNA DKFZp686L11144 (from clone DKFZp686L11144) PA
BX640608.1 Homo sapiens mRNA; cDNA DKFZp686M04163 (from clone DKFZp686M04163) PA
AY450391.1 Homo sapiens DNA polymerase-transactivated protein 3 (DNAPTP3) mRNA, complete cds A
NM_212482.1 Homo sapiens fibronectin 1 (FN1), transcript variant 1, mRNA PA
NM_212478.1 Homo sapiens fibronectin 1 (FN1), transcript variant 4, mRNA PA
NM_212476.1 Homo sapiens fibronectin 1 (FN1), transcript variant 5, mRNA PA
NM_212474.1 Homo sapiens fibronectin 1 (FN1), transcript variant 6, mRNA PA
BC078656.1 Homo sapiens cDNA clone IMAGE:30347017, containing frame-shift errors PA
CR749666.1 Homo sapiens mRNA; cDNA DKFZp686O13149 (from clone DKFZp686O13149) PA
CR749317.1 Homo sapiens mRNA; cDNA DKFZp686H0342 (from clone DKFZp686H0342) PA
CR749316.1 Homo sapiens mRNA; cDNA DKFZp686K08164 (from clone DKFZp686K08164) PA
CR749281.1 Homo sapiens mRNA; cDNA DKFZp686F10164 (from clone DKFZp686F10164) P
M10905.1 Human cellular fibronectin mRNA P
AB191261.1 Homo sapiens FN1 mRNA for fibronectin 1, complete cds P
U41724.1 Human fibronectin (FN1) mRNA, alternative splicing variant V0, partial cds P
U42592.1 Human fibronectin (FN1) mRNA, C-terminal domains, partial cds P
CR936623.1 Homo sapiens mRNA; cDNA DKFZp686I1370 (from clone DKFZp686I1370) PA
AB209840.1 Homo sapiens mRNA for Fibronectin 1 variant protein P
AB209287.1 Homo sapiens mRNA for Fibronectin 1 variant protein P
AJ849445.1 Homo sapiens FN1 precursor mRNA for migration stimulating factor (FN1 gene) PA
BC100030.1 Homo sapiens cDNA clone IMAGE:30343682, containing frame-shift errors PA
AK026737.1 Homo sapiens cDNA: FLJ23084 fis, clone LNG06602, highly similar to HSFIB1 Human mRNA for fibronectin (FN precursor) A
AJ276395.1 Homo sapiens mRNA for MSF-FN70 (FN gene) PA
BC117176.1 Homo sapiens fibronectin 1, mRNA (cDNA clone MGC:150785 IMAGE:40125727), complete cds P
BC005858.2 Homo sapiens fibronectin 1, mRNA (cDNA clone IMAGE:3506187), partial cds PA
EF550135.1 Homo sapiens fibronectin splice variant F (FN1) mRNA, partial cds, alternatively spliced P
EF550134.1 Homo sapiens fibronectin splice variant E (FN1) mRNA, partial cds, alternatively spliced P
EF550133.1 Homo sapiens fibronectin splice variant D (FN1) mRNA, partial cds, alternatively spliced P
EF550132.1 Homo sapiens fibronectin splice variant C (FN1) mRNA, partial cds, alternatively spliced P
EF550131.1 Homo sapiens fibronectin splice variant B (FN1) mRNA, partial cds, alternatively spliced P
EF550130.1 Homo sapiens fibronectin splice variant A (FN1) mRNA, partial cds, alternatively spliced P
NM_054034.2 Homo sapiens fibronectin 1 (FN1), transcript variant 7, mRNA PA
NM_002026.2 Homo sapiens fibronectin 1 (FN1), transcript variant 3, mRNA PA
AK094277.1 Homo sapiens cDNA FLJ36958 fis, clone BRACE2005881 A
AK094153.1 Homo sapiens cDNA FLJ36834 fis, clone ASTRO2010962, moderately similar to FIBRONECTIN PRECURSOR
AL832771.1 Homo sapiens mRNA; cDNA DKFZp686B197 (from clone DKFZp686B197) PA
AL832202.1 Homo sapiens mRNA; cDNA DKFZp686H112 (from clone DKFZp686H112) PA
AK300458.1 Homo sapiens cDNA FLJ54550 complete cds, highly similar to Homo sapiens fibronectin 1 (FN1), transcript variant 6, mRNA P
AK300246.1 Homo sapiens cDNA FLJ53292 complete cds, highly similar to Homo sapiens fibronectin 1 (FN1), transcript variant 5, mRNA P
AK300216.1 Homo sapiens cDNA FLJ61165 complete cds, highly similar to Fibronectin precursor P
AK297733.1 Homo sapiens cDNA FLJ53365 complete cds, highly similar to Homo sapiens fibronectin 1 (FN1), transcript variant 4, mRNA P
X02761.1 Human mRNA for fibronectin (FN precursor) P
BC016875.2 Homo sapiens fibronectin 1, mRNA (cDNA clone IMAGE:3886582), partial cds PA
AJ320527.1 Homo sapiens partial mRNA for fibronectin III-15X splice variant (FN gene) P
AJ320526.1 Homo sapiens partial mRNA for fibronectin (V+III-15)- splice variant (FN gene) P
AJ320525.1 Homo sapiens partial mRNA for fibronectin (V+I-10)- splice variant (FN gene) P
AF312399.1 Homo sapiens fibronectin mRNA, partial cds P
U60068.1 Human fibronectin mRNA, alternatively spliced, partial cds P
U42594.1 Human fibronectin (FN1) mRNA, splice variant, partial cds P
U42593.1 Human fibronectin (FN1) mRNA, splice variant, partial cds P
U42404.1 Human fibronectin (FN1) mRNA, N-terminal domains, partial cds P
U41850.1 Human fibronectin (FN1) mRNA, alternative splicing variant V89, partial cds P
U60067.1 Human fibronectin mRNA, partial cds P
U42458.1 Human fibronectin (FN1) mRNA, splice variant not containing EIIIA domain, partial cds P
U42455.1 Human fibronectin (FN1) mRNA, alternative splicing variant V89, partial cds P
U42457.1 Human fibronectin (FN1) mRNA, splice variant not containing EIIIB domain, partial cds P
M27590.1 Human liver fibronectin mRNA, partial cds
M27589.1 Human liver fibronectin mRNA, partial cds P
BC143763.1 Homo sapiens fibronectin 1, mRNA (cDNA clone MGC:177294 IMAGE:9052277), complete cds P
BC143754.1 Homo sapiens fibronectin 1, mRNA (cDNA clone MGC:177285 IMAGE:9052268), complete cds P
AK316350.1 Homo sapiens cDNA, FLJ79249 complete cds, highly similar to Homo sapiens fibronectin 1 (FN1), transcript variant 4, mRNA P
AJ535086.1 Homo sapiens mRNA for migration stimulation factor FN70+ (FN gene) PA

EST sequences (10 of 7363) [Show all sequences]

AA975346.1 Clone IMAGE:1558919 lung 3' read A
R15348.1 Clone IMAGE:29580 brain 5' read P
AA991656.1 Clone IMAGE:1612083 uncharacterized tissue 3' read
AA995472.1 Clone IMAGE:1610407 uncharacterized tissue 3' read A
AA995788.1 Clone IMAGE:1606777 kidney 3' read A
AI000837.1 Clone IMAGE:1609367 mammary gland 3' read A
AA904717.1 Clone IMAGE:1504070 mixed 3' read A
AI003536.1 Clone IMAGE:1699139 kidney 3' read A
AI014755.1 Clone IMAGE:1611147 uncharacterized tissue 3' read A
AI017386.1 Clone IMAGE:1635289 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help