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UGID:160120     UniGene Hs.188553     Homo sapiens (human)   RBBP6
Retinoblastoma binding protein 6 (RBBP6)

Human protein-coding gene RBBP6. Represented by 594 ESTs from 250 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 160120 - Hs.188553]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_008841.2 RBBP6 gene product H. sapiens 100.0 1791
XP_001164014.1 PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform 6 P. troglodytes 99.9 1791
NP_035377.2 Rbbp6 gene product M. musculus 94.6 1789
NP_001180603.1 retinoblastoma-binding protein 6 isoform 1 D. rerio 60.5 1754
NP_001246487.1 something that sticks like glue, isoform B D. melanogaster 47.6 170
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_003916735.1 PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform 1 P. anubis 99.4 1791
XP_001097618.1 PREDICTED: retinoblastoma-binding protein 6 isoform 5 M. mulatta 99.3 1790

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; uncharacterized tissue; brain; testis; mixed; embryonic tissue; lung; prostate; kidney; uterus; eye; liver; thymus; mammary gland; ear; intestine; bladder; ovary; vascular; bone; bone marrow; spleen; connective tissue; lymph node; pancreas; thyroid; larynx; muscle; stomach; mouth; skin; blood; heart; pituitary gland; cervix; parathyroid; esophagus; ascites; umbilical cord; adipose tissue; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.2
UniSTS entry: Chr 16 SHGC-61177 [Map Viewer]
UniSTS entry: Chr 16 RH71297
UniSTS entry: Chr 16 SHGC-61139 [Map Viewer]
UniSTS entry: Chr 16 RH48310
UniSTS entry: Chr 16 RH69978 [Map Viewer]
UniSTS entry: Chr 16 SHGC-82501
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (27)

AB112075.1 Homo sapiens RBBP6 mRNA for retinoblastoma binding protein 6 isoform 2, complete cds PA
AB112074.1 Homo sapiens RBBP6 mRNA for retinoblastoma binding protein 6 isoform 1, complete cds PA
NM_018703.3 Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 2, mRNA PA
BX648661.1 Homo sapiens mRNA; cDNA DKFZp686P0638 (from clone DKFZp686P0638) PA
NM_006910.4 Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 1, mRNA PA
BC063524.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:4369701), partial cds PA
AY072922.1 Homo sapiens p53-associated cellular protein PACT (PACT) mRNA, complete cds PA
BC073938.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:5229358), partial cds PA
AL359564.1 Homo sapiens mRNA; cDNA DKFZp761B2423 (from clone DKFZp761B2423) PA
BC101142.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014935), complete cds P
BC101141.2 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014933), complete cds P
BC101140.2 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014932), complete cds P
BC101139.2 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014931), complete cds P
AK026954.1 Homo sapiens cDNA: FLJ23301 fis, clone HEP11120 PA
BC114354.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014937), complete cds P
BC114353.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014936), complete cds P
BC118667.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014938), complete cds P
NM_032626.5 Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 3, mRNA PA
BC139830.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:40014940), complete cds P
AF352051.1 Homo sapiens proliferation potential-related protein mRNA, complete cds PA
BC015318.1 Homo sapiens, clone IMAGE:4415312, mRNA, partial cds PA
X85133.1 H.sapiens RBQ-1 mRNA PA
BC029352.1 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:4593989), complete cds PA
AK303040.1 Homo sapiens cDNA FLJ59289 partial cds, highly similar to Retinoblastoma-binding protein 6 P
BC030964.1 Homo sapiens, clone IMAGE:4272381, mRNA PA
BC029649.2 Homo sapiens retinoblastoma binding protein 6, mRNA (cDNA clone IMAGE:5140877), partial cds PA
AF116625.1 Homo sapiens PRO1155 mRNA, complete cds PA

EST sequences (10 of 594) [Show all sequences]

R14142.1 Clone IMAGE:28402 brain 5' read P
AA969801.1 Clone IMAGE:1572714 kidney 3' read
AA971604.1 Clone IMAGE:1583559 mixed 3' read A
AA978103.1 Clone IMAGE:1578509 mixed 3' read A
AA991554.1 Clone IMAGE:1609687 mammary gland 3' read PA
AA887555.1 Clone IMAGE:1500903 kidney 3' read P
AI034480.1 Clone IMAGE:1656555 mixed 3' read
AI039377.1 Clone IMAGE:1658777 embryonic tissue 3' read A
AI040831.1 Clone IMAGE:1657578 embryonic tissue 3' read P
AA910160.1 Clone IMAGE:1524460 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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