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UGID:159889     UniGene Hs.187377     Homo sapiens (human)   TMC7
Transmembrane channel-like 7 (TMC7)

Human protein-coding gene TMC7. Represented by 44 ESTs from 30 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 159889 - Hs.187377]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_079123.3 TMC7 gene product H. sapiens 100.0 722
NP_766064.2 Tmc7 gene product M. musculus 92.9 720
XP_002664983.1 PREDICTED: transmembrane channel-like 4 D. rerio 48.0 250
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_510854.2 PREDICTED: transmembrane channel-like 7 isoform 2 P. troglodytes 99.5 722
XP_001083257.1 PREDICTED: transmembrane channel-like 7 isoform 2 M. mulatta 98.6 722

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; placenta; uncharacterized tissue; prostate; blood; embryonic tissue; uterus; stomach; mixed; mammary gland; ganglia; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.3
UniSTS entry: Chr 1 D15S1477
UniSTS entry: Chr 16 D16S410 [Map Viewer]
UniSTS entry: Chr 16 D16S410 [Map Viewer]
UniSTS entry: Chr 1 D11S2560
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC047719.1 Homo sapiens transmembrane channel-like 7, mRNA (cDNA clone MGC:52105 IMAGE:5743899), complete cds PA
AY263165.1 Homo sapiens TMC7 protein (TMC7) mRNA, complete cds PA
AY236498.1 Homo sapiens transmembrane channel-like protein 7 (TMC7) mRNA, complete cds PA
CR933669.1 Homo sapiens mRNA; cDNA DKFZp781O2274 (from clone DKFZp781O2274) PA
AK024893.1 Homo sapiens cDNA: FLJ21240 fis, clone COL01132 PA
NM_024847.3 Homo sapiens transmembrane channel-like 7 (TMC7), transcript variant 1, mRNA P
AK293874.1 Homo sapiens cDNA FLJ60454 complete cds, highly similar to Homo sapiens transmembrane channel-like 7 (TMC7), mRNA P
NM_001160364.1 Homo sapiens transmembrane channel-like 7 (TMC7), transcript variant 2, mRNA P
BC036205.1 Homo sapiens transmembrane channel-like 7, mRNA (cDNA clone MGC:39608 IMAGE:5261157), complete cds PA

EST sequences (10 of 44) [Show all sequences]

AA926961.1 Clone IMAGE:1552387 uncharacterized tissue 3' read
AA770338.1 Clone 1322197 testis 3' read P
AA833616.1 Clone 1392403 testis 3' read P
AI621343.1 Clone IMAGE:2282106 uterus 3' read A
AL043885.2 Clone DKFZp434C0628 testis 3' read
CB989922.1 Clone IMAGE:30341596 placenta 5' read P
BX330918.1 Clone CS0DJ013YM10 blood 3' read P
BX383607.2 Clone CS0DJ013YM10 blood 5' read P
AW008199.1 Clone IMAGE:2533067 stomach 3' read A
CD642173.1 Clone IMAGE:30421699 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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