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UGID:159208     UniGene Hs.181159     Homo sapiens (human)   TEF
Thyrotrophic embryonic factor (TEF)

Human protein-coding gene TEF. Represented by 363 ESTs from 137 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 159208 - Hs.181159]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002798412.1 PREDICTED: thyrotroph embryonic factor M. mulatta 100.0 307
XP_003905650.1 PREDICTED: thyrotroph embryonic factor P. anubis 100.0 302
XP_525607.3 PREDICTED: thyrotroph embryonic factor P. troglodytes 100.0 302
NP_003207.1 TEF gene product H. sapiens 100.0 302
XP_003364351.1 PREDICTED: thyrotroph embryonic factor-like E. caballus 99.6 272
NP_059072.1 Tef gene product M. musculus 99.0 300
NP_001080248.1 D site of albumin promoter (albumin D-box) binding protein X. laevis 75.1 272
NP_571475.1 tefa gene product D. rerio 70.6 285
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
NP_062067.2 Tef gene product R. norvegicus 99.3 300
XP_002721438.1 PREDICTED: thyrotrophic embryonic factor isoform 1 O. cuniculus 99.0 304

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mouth; liver; ovary; uterus; ear; eye; intestine; prostate; skin; placenta; embryonic tissue; esophagus; kidney; lung; mixed; cervix; muscle; uncharacterized tissue; pancreas; trachea; thymus; larynx; spleen; lymph node; mammary gland; connective tissue; thyroid; salivary gland; nerve; bone; parathyroid
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.2
UniSTS entry: Chr 22 RH11229
UniSTS entry: Chr 22 RH11259
UniSTS entry: Chr 22 WI-20437 [Map Viewer]
UniSTS entry: Chr 22 RH66783
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC042476.2 Homo sapiens thyrotrophic embryonic factor, mRNA (cDNA clone MGC:24963 IMAGE:4915095), complete cds PA
BX537848.1 Homo sapiens mRNA; cDNA DKFZp686D1282 (from clone DKFZp686D1282) PA
NM_003216.3 Homo sapiens thyrotrophic embryonic factor (TEF), transcript variant 1, mRNA P
AL122101.1 Homo sapiens mRNA; cDNA DKFZp434F0217 (from clone DKFZp434F0217) A
CR456592.1 Homo sapiens TEF full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.TEF) P
CR541827.1 Homo sapiens full open reading frame cDNA clone RZPDo834D0532D for gene TEF, thyrotrophic embryonic factor; complete cds, without stopcodon P
U06935.1 Human thyrotroph embryonic factor (TEF) mRNA, complete cds P
U44059.1 Human thyrotroph embryonic factor (TEF) mRNA, complete cds P
AK314906.1 Homo sapiens cDNA, FLJ95811, Homo sapiens thyrotrophic embryonic factor (TEF), mRNA P
BC021980.2 Homo sapiens thyrotrophic embryonic factor, mRNA (cDNA clone IMAGE:4100134), partial cds A
AK295595.1 Homo sapiens cDNA FLJ61120 complete cds, highly similar to Thyrotroph embryonic factor P
NM_001145398.2 Homo sapiens thyrotrophic embryonic factor (TEF), transcript variant 2, mRNA P
HM370396.1 Homo sapiens thyrotrophic embryonic factor (TEF) mRNA, partial cds, alternatively spliced
BC039258.1 Homo sapiens thyrotrophic embryonic factor, mRNA (cDNA clone MGC:33801 IMAGE:5286096), complete cds PA

EST sequences (10 of 363) [Show all sequences]

AA983452.1 Clone IMAGE:1591590 kidney 3' read
AI014348.1 Clone IMAGE:1539140 brain 3' read
CB048136.1 Clone IMAGE:3270450 prostate 5' read A
CB048135.1 Clone IMAGE:3270450 prostate 3' read A
AI202244.1 Clone IMAGE:1942970 prostate 3' read
AI264254.1 Clone IMAGE:1869502 kidney 3' read
AI268002.1 Clone IMAGE:1911455 lung 3' read
CB158120.1 Clone L18POOL1n1-8-C05 liver 5' read
CB134388.1 Clone B1T694954-13-G07 brain 5' read
CB155521.1 Clone B2N807043-33-A06 brain 5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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