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UGID:158846     UniGene Hs.177926     Homo sapiens (human)   LOC81691
Exonuclease NEF-sp (LOC81691)

Human protein-coding gene LOC81691. Represented by 494 ESTs from 92 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 158846 - Hs.177926]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_112203.2 LOC81691 gene product H. sapiens 100.0 773
NP_001233411.1 LOC453977 gene product P. troglodytes 99.7 773
NP_082405.1 exonuclease NEF-sp isoform 2 M. musculus 75.1 437
XP_965348.1 hypothetical protein NCU02961 N. crassa 49.7 163
NP_648050.1 CG8368, isoform A D. melanogaster 46.1 191
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_001088611.1 PREDICTED: putative RNA exonuclease NEF-sp isoform 2 M. mulatta 97.7 771
XP_003916676.1 PREDICTED: putative RNA exonuclease NEF-sp-like isoform 1 P. anubis 97.5 771

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; blood; eye; adrenal gland; stomach; skin; mammary gland; mixed; parathyroid; trachea; prostate; ovary; liver; muscle; lung; ascites; bone; pancreas; bone marrow; lymph node; embryonic tissue; kidney; uterus; cervix; placenta; lymph
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12.3
UniSTS entry: Chr 16 SHGC-60631 [Map Viewer]
UniSTS entry: Chr 16 G60267
UniSTS entry: Chr 16 RH75228
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC068503.1 Homo sapiens exonuclease NEF-sp, mRNA (cDNA clone MGC:87245 IMAGE:5298867), complete cds PA
AL162035.1 Homo sapiens mRNA; cDNA DKFZp434P2072 (from clone DKFZp434P2072); partial cds PA
AL136763.2 Homo sapiens mRNA; cDNA DKFZp434J0315 (from clone DKFZp434J0315) PA
AF332193.1 Homo sapiens exonuclease NEF-sp mRNA, complete cds PA
NM_030941.2 Homo sapiens exonuclease NEF-sp (LOC81691), transcript variant 1, mRNA PA
BC007646.1 Homo sapiens exonuclease NEF-sp, mRNA (cDNA clone MGC:15944 IMAGE:3537866), complete cds PA
AK314458.1 Homo sapiens cDNA, FLJ95260, highly similar to Homo sapiens exonuclease NEF-sp (LOC81691), mRNA P
NM_001144924.1 Homo sapiens exonuclease NEF-sp (LOC81691), transcript variant 2, mRNA PA
NM_001199053.1 Homo sapiens exonuclease NEF-sp (LOC81691), transcript variant 3, mRNA PA

EST sequences (10 of 494) [Show all sequences]

AA947564.1 Clone IMAGE:1374933 ovary
R14341.1 Clone IMAGE:28543 brain 5' read P
AA973800.1 Clone IMAGE:1569171 lung 3' read PA
AI032850.1 Clone IMAGE:1656641 mixed 3' read A
AI033052.1 Clone IMAGE:1654385 mixed 3' read A
AI138305.1 Clone IMAGE:1735895 testis 3' read A
AI138599.1 Clone IMAGE:1736279 testis 3' read PA
AI139770.1 Clone IMAGE:1737777 testis 3' read PA
BX115403.1 Clone IMAGp998N23144_;_IMAGE:28543 brain PA
AI167897.1 Clone IMAGE:1682703 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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