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UGID:157481     UniGene Hs.169982     Homo sapiens (human)   TMEM254
Transmembrane protein 254 (TMEM254)

Human protein-coding gene TMEM254. Represented by 397 ESTs from 191 cDNA libraries. Corresponds to 13 reference sequences (different isoforms). [UniGene 157481 - Hs.169982]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003312695.1 PREDICTED: transmembrane protein C10orf57 homolog isoform 2 P. troglodytes 100.0 146
NP_001257296.1 TMEM254 gene product H. sapiens 100.0 146
NP_080955.1 Tmem254a gene product M. musculus 86.2 122
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_001088642.1 PREDICTED: transmembrane protein C10orf57 homolog isoform 2 M. mulatta 95.1 121
XP_003903754.1 PREDICTED: transmembrane protein C10orf57 homolog P. anubis 94.4 107

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; placenta; prostate; embryonic tissue; eye; adipose tissue; larynx; kidney; lung; uncharacterized tissue; intestine; adrenal gland; muscle; pituitary gland; blood; vascular; uterus; liver; skin; mammary gland; ovary; connective tissue; pharynx; pancreas; stomach; esophagus; thymus; trachea; thyroid; bone marrow; parathyroid; epididymis; ascites; cervix; lymph node; heart; spleen; bone; pineal gland; bladder
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q22.3
UniSTS entry: Chr 10 WI-21569 [Map Viewer]
UniSTS entry: Chr 10 RH98939
UniSTS entry: Chr 10 WI-22546 [Map Viewer]
UniSTS entry: Chr 14 SHGC-53357
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (27)

BX537803.1 Homo sapiens mRNA; cDNA DKFZp686B23158 (from clone DKFZp686B23158) PA
CR457310.1 Homo sapiens full open reading frame cDNA clone RZPDo834F089D for gene FLJ13263, hypothetical protein FLJ13263; complete cds, incl. stopcodon P
AK222536.1 Homo sapiens mRNA for chromosome 10 open reading frame 57 variant, clone: adSE01381 P
AK023325.1 Homo sapiens cDNA FLJ13263 fis, clone OVARC1000924 P
DQ786319.1 Homo sapiens clone HLS_IMAGE_823588 mRNA sequence A
NM_025125.3 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 1, mRNA PA
BC022252.1 Homo sapiens chromosome 10 open reading frame 57, mRNA (cDNA clone MGC:22197 IMAGE:4668550), complete cds PA
AK311563.1 Homo sapiens cDNA, FLJ18605 P
AK310160.1 Homo sapiens cDNA, FLJ17202 P
AK309980.1 Homo sapiens cDNA, FLJ17022 P
AK309425.1 Homo sapiens cDNA, FLJ99466 P
AL832483.1 Homo sapiens mRNA; cDNA DKFZp686M1819 (from clone DKFZp686M1819) P
AL832397.1 Homo sapiens mRNA; cDNA DKFZp667M1512 (from clone DKFZp667M1512) PA
AK300490.1 Homo sapiens cDNA FLJ61168 complete cds P
AF147339.1 Homo sapiens full length insert cDNA clone YB28C01 A
NR_072987.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 13, non-coding RNA A
NR_072985.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 11, non-coding RNA PA
NM_001270374.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 9, mRNA PA
NM_001270372.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 7, mRNA PA
NM_001270370.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 5, mRNA PA
NM_001270368.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 3, mRNA PA
NR_072986.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 12, non-coding RNA PA
NR_072984.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 10, non-coding RNA PA
NM_001270373.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 8, mRNA PA
NM_001270371.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 6, mRNA PA
NM_001270369.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 4, mRNA PA
NM_001270367.1 Homo sapiens transmembrane protein 254 (TMEM254), transcript variant 2, mRNA PA

EST sequences (10 of 397) [Show all sequences]

AA865899.1 Clone IMAGE:1457059 kidney 3' read A
AA992217.1 Clone IMAGE:1618155 testis 3' read A
AA906512.1 Clone IMAGE:1506870 mixed 3' read A
AI023470.1 Clone IMAGE:1654626 mixed 3' read A
AI032543.1 Clone IMAGE:1654789 mixed 3' read A
AI042075.1 Clone IMAGE:1664920 skin 3' read A
R20023.1 Clone IMAGE:33855 brain 5' read
AI073556.1 Clone IMAGE:1640291 testis 3' read A
R21073.1 Clone IMAGE:36015 brain 5' read
AI095550.1 Clone IMAGE:1696742 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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