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UGID:157454     UniGene Hs.169875     Homo sapiens (human)   THBS3
Thrombospondin 3 (THBS3)

Human protein-coding gene THBS3. Represented by 312 ESTs from 151 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 157454 - Hs.169875]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001154764.1 PREDICTED: thrombospondin-3 isoform 12 P. troglodytes 100.0 955
NP_009043.1 THBS3 gene product H. sapiens 100.0 955
XP_001115770.1 PREDICTED: thrombospondin-3 isoform 8 M. mulatta 99.9 955
XP_003892809.1 PREDICTED: thrombospondin-3 isoform 1 P. anubis 99.9 955
NP_038719.2 Thbs3 gene product M. musculus 98.4 955
NP_001080647.1 thrombospondin 3 precursor X. laevis 87.7 949
NP_775332.1 thbs3a gene product D. rerio 81.2 948
NP_001137803.1 thrombospondin, isoform G D. melanogaster 58.6 630
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003365057.1 PREDICTED: thrombospondin-3 isoform 3 E. caballus 99.2 908
XP_003434941.1 PREDICTED: thrombospondin-3 C. lupus familiaris 99.0 955

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; lung; brain; stomach; connective tissue; embryonic tissue; intestine; uterus; eye; uncharacterized tissue; mixed; bone; placenta; mammary gland; prostate; pancreas; muscle; liver; mouth; adrenal gland; spleen; trachea; skin; pharynx; blood; thyroid; lymph; thymus; ascites; heart; kidney; pituitary gland; ovary; lymph node; amniotic fluid; nerve; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q21
UniSTS entry: Chr 1 RH69319 [Map Viewer]
UniSTS entry: Chr 1 WI-12606 [Map Viewer]
UniSTS entry: Chr 6 RH1540 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

NM_007112.4 Homo sapiens thrombospondin 3 (THBS3), transcript variant 1, mRNA PA
AK223278.1 Homo sapiens mRNA for thrombospondin 3 precursor variant, clone: SYN03003 PA
L38969.1 Homo sapiens thrombospondin 3 (THBS3) mRNA, complete cds P
BC113847.1 Homo sapiens thrombospondin 3, mRNA (cDNA clone MGC:119564 IMAGE:40008343), complete cds P
BC113846.1 Homo sapiens thrombospondin 3, mRNA (cDNA clone MGC:119565 IMAGE:40008346), complete cds P
BC018786.1 Homo sapiens, Similar to thrombospondin 3, clone IMAGE:4875844, mRNA, partial cds PA
AK314337.1 Homo sapiens cDNA, FLJ95097 P
AK298592.1 Homo sapiens cDNA FLJ60323 complete cds, highly similar to Thrombospondin-3 precursor P
AK298914.1 Homo sapiens cDNA FLJ54128 complete cds, highly similar to Thrombospondin-3 precursor P
AK074796.1 Homo sapiens cDNA FLJ90315 fis, clone NT2RP2001480, highly similar to Thrombospondin-3 precursor P
NM_001252608.1 Homo sapiens thrombospondin 3 (THBS3), transcript variant 3, mRNA PA
NM_001252607.1 Homo sapiens thrombospondin 3 (THBS3), transcript variant 2, mRNA PA
NR_045553.1 Homo sapiens thrombospondin 3 (THBS3), transcript variant 4, non-coding RNA PA

EST sequences (10 of 312) [Show all sequences]

AA962347.1 Clone IMAGE:1580059 mixed 3' read
AA909592.1 Clone IMAGE:1522936 mixed 3' read
AI015183.1 Clone IMAGE:1623293 embryonic tissue 3' read
AA909949.1 Clone IMAGE:1542773 mixed 3' read
AI021973.1 Clone IMAGE:1655368 mixed 3' read P
AI040629.1 Clone IMAGE:1656831 mixed 3' read
AI075721.1 Clone IMAGE:1676320 embryonic tissue 3' read A
AI151444.1 Clone IMAGE:1721331 uterus 3' read
BX115945.1 Clone IMAGp998O16780_;_IMAGE:341991 heart P
AI189782.1 Clone IMAGE:1725518 placenta 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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