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UGID:156925     UniGene Hs.165195     Homo sapiens (human)   VAPA
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA)

Human protein-coding gene VAPA. Represented by 1005 ESTs from 347 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 156925 - Hs.165195]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003914198.1 PREDICTED: vesicle-associated membrane protein-associated protein A isoform 2 P. anubis 100.0 293
XP_512022.2 PREDICTED: vesicle-associated membrane protein-associated protein A isoform 3 P. troglodytes 100.0 293
NP_003565.4 VAPA gene product H. sapiens 100.0 293
XP_001118496.1 PREDICTED: vesicle-associated membrane protein-associated protein A-like M. mulatta 100.0 266
XP_002713619.1 PREDICTED: vesicle-associated membrane protein-associated protein A isoform 1 O. cuniculus 99.7 292
NP_038961.2 Vapa gene product M. musculus 98.4 248
NP_001002546.1 vapal gene product D. rerio 84.2 245
NP_001088528.1 vesicle-associated membrane protein-associated protein B/C X. laevis 77.0 242
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_537332.1 PREDICTED: vesicle-associated membrane protein-associated protein A isoform 1 C. lupus familiaris 98.3 293
XP_001489616.2 PREDICTED: vesicle-associated membrane protein-associated protein A-like E. caballus 98.1 268

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; lung; placenta; embryonic tissue; uterus; uncharacterized tissue; connective tissue; eye; pancreas; intestine; kidney; adrenal gland; liver; muscle; bladder; skin; prostate; vascular; ovary; blood; trachea; ear; bone marrow; stomach; mammary gland; larynx; bone; nerve; lymph node; heart; pituitary gland; thymus; thyroid; esophagus; cervix; spleen; pharynx; adipose tissue; pineal gland; lymph; salivary gland; ascites; ganglia; tonsil; epididymis; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18p11.22
UniSTS entry: Chr 18 RH76596
UniSTS entry: Chr 18 D18S1196 [Map Viewer]
UniSTS entry: Chr 18 A006C24
UniSTS entry: Chr 18 G20701
UniSTS entry: Chr 18 SHGC-32407 [Map Viewer]
UniSTS entry: Chr 18 A006V14 [Map Viewer]
UniSTS entry: Chr 18 SHGC-34906 [Map Viewer]
UniSTS entry: Chr 18 RH35901
UniSTS entry: Chr 18 RH92706
UniSTS entry: Chr 1 D11S2560
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC042860.1 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa, mRNA (cDNA clone IMAGE:5314967) A
AF057358.1 Homo sapiens VAMP-associated protein of 33 kDa (VAP-33) mRNA, complete cds P
AF044670.1 Homo sapiens 33 kDa Vamp-associated protein (VAP33) mRNA, complete cds PA
AF086627.1 Homo sapiens VAMP-associated protein A (VAP-A) mRNA, complete cds P
NM_194434.2 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), transcript variant 2, mRNA P
NM_003574.5 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), transcript variant 1, mRNA P
BT019618.1 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa mRNA, complete cds P
AF154847.1 Homo sapiens 33 kDa Vamp-associated protein (VAMP) mRNA, complete cds PA
AK024299.1 Homo sapiens cDNA FLJ14237 fis, clone NT2RP4000517
BC002992.1 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa, mRNA (cDNA clone MGC:3745 IMAGE:2822547), complete cds PA
AK292948.1 Homo sapiens cDNA FLJ78586 complete cds, highly similar to Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), mRNA P
AK315577.1 Homo sapiens cDNA, FLJ96653, Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), mRNA P
BC033947.2 Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa, mRNA (cDNA clone IMAGE:5285417) A
AK096868.1 Homo sapiens cDNA FLJ39549 fis, clone RECTM1000051

EST sequences (10 of 1005) [Show all sequences]

AA954574.1 Clone IMAGE:1563096 mixed 3' read
AA969237.1 Clone IMAGE:1560764 mixed 3' read A
AA996171.1 Clone IMAGE:1606522 kidney 3' read A
AA885946.1 Clone IMAGE:1500563 kidney 3' read A
AA887602.1 Clone IMAGE:1502043 kidney 3' read A
AA906319.1 Clone IMAGE:1506784 mixed 3' read A
T05713.1 Clone HFBDF34 brain
AA909431.1 Clone IMAGE:1523419 mixed 3' read
AI005339.1 Clone IMAGE:1632221 mammary gland 3' read A
AI005449.1 Clone IMAGE:1626220 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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