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UGID:156710     UniGene Hs.164021     Homo sapiens (human)   CXCL6
Chemokine (C-X-C motif) ligand 6 (CXCL6)

Human protein-coding gene CXCL6. Represented by 130 ESTs from 42 cDNA libraries. EST representation biased toward vascular; adult. Corresponds to reference sequence NM_002993.3. [UniGene 156710 - Hs.164021]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002984.1 CXCL6 gene product H. sapiens 100.0 113
Other hits (2 of 7) [Show all]SpeciesId(%)Len(aa)
XP_001156255.1 PREDICTED: c-X-C motif chemokine 6 isoform 2 P. troglodytes 98.2 113
XP_001103136.1 PREDICTED: c-X-C motif chemokine 6 isoform 2 M. mulatta 87.8 122

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: vascular [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: vascular; kidney; spleen; liver; lung; prostate; embryonic tissue; eye; bladder; mixed; placenta; uncharacterized tissue; intestine; connective tissue; uterus; adipose tissue; ganglia; pancreas; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q13.3
UniSTS entry: Chr 4 PMC201041P2
UniSTS entry: Chr 4 RH70711
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

U81234.1 Human chemokine alpha 3 (CKA-3) mRNA, complete cds PA
NM_002993.3 Homo sapiens chemokine (C-X-C motif) ligand 6 (CXCL6), mRNA PA
BC013744.1 Homo sapiens chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2), mRNA (cDNA clone MGC:21713 IMAGE:4471095), complete cds PA
AK311981.1 Homo sapiens cDNA, FLJ92254, Homo sapiens chemokine (C-X-C motif) ligand 6 (granulocytechemotactic protein 2) (CXCL6), mRNA P
Y08770.1 H.sapiens mRNA for granulocyte chemotactic protein P

EST sequences (10 of 130) [Show all sequences]

BX119115.1 Clone IMAGp998C086061_;_IMAGE:2437951 uterus A
CB112103.1 Clone L5HLK1-13-D03 liver 5' read P
CB147271.1 Clone L7N800102-17-F08 liver 5' read P
AI391519.1 Clone IMAGE:2108870 uncharacterized tissue 3' read A
AI668847.1 Clone IMAGE:2315207 prostate 3' read A
CB529862.1 Clone UI-H-FT2-bji-i-08-0-UI lung 3' read A
AI860457.1 Clone IMAGE:2422902 lung 3' read A
AI889554.1 Clone IMAGE:2437951 uterus 3' read A
BX395980.2 Clone CS0DI009YF03 placenta 3' read
BX380731.2 Clone CS0DI056YL18 placenta 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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