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UGID:156330     UniGene Hs.162397     Homo sapiens (human)   INTS9
Integrator complex subunit 9 (INTS9)

Human protein-coding gene INTS9. Represented by 266 ESTs from 147 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 156330 - Hs.162397]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003902651.1 PREDICTED: integrator complex subunit 9 isoform 1 P. anubis 100.0 657
XP_001166975.1 PREDICTED: integrator complex subunit 9 isoform 6 P. troglodytes 100.0 657
NP_060720.2 INTS9 gene product H. sapiens 100.0 657
XP_001111495.2 PREDICTED: integrator complex subunit 9-like M. mulatta 100.0 502
XP_002709344.1 PREDICTED: integrator complex subunit 9 O. cuniculus 99.7 658
NP_700463.2 Ints9 gene product M. musculus 98.8 684
NP_001086545.1 integrator complex subunit 9 X. laevis 92.1 657
NP_001070738.1 ints9 gene product D. rerio 87.8 657
NP_648838.3 integrator 9 D. melanogaster 60.4 653
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_004004490.1 PREDICTED: integrator complex subunit 9 O. aries 99.4 657
XP_543216.2 PREDICTED: integrator complex subunit 9 C. lupus familiaris 99.2 657

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lymph; uncharacterized tissue; adrenal gland; testis; intestine; vascular; ovary; pancreas; lung; prostate; mammary gland; skin; mixed; blood; liver; trachea; eye; cervix; lymph node; uterus; embryonic tissue; pharynx; placenta; kidney; bone marrow; mouth; tonsil; connective tissue; pituitary gland; muscle; thymus; ascites; spleen; larynx; stomach
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p21.1
UniSTS entry: Chr 8 SHGC-24116 [Map Viewer]
UniSTS entry: Chr 8 D8S1973
UniSTS entry: RH12254
UniSTS entry: Chr 8 SHGC-31253 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK001733.1 Homo sapiens cDNA FLJ10871 fis, clone NT2RP4001696, weakly similar to CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KD SUBUNIT P
NM_018250.3 Homo sapiens integrator complex subunit 9 (INTS9), transcript variant 1, mRNA PA
AK225530.1 Homo sapiens mRNA for related to CPSF subunits 74 kDa variant, clone: KAT08458 PA
AK225072.1 Homo sapiens mRNA for related to CPSF subunits 74 kDa variant, clone: CAE06320 P
BC025267.1 Homo sapiens integrator complex subunit 9, mRNA (cDNA clone MGC:39162 IMAGE:5426533), complete cds PA
BC016687.1 Homo sapiens integrator complex subunit 9, mRNA (cDNA clone IMAGE:3924592) PA
AK304525.1 Homo sapiens cDNA FLJ52404 complete cds, highly similar to Homo sapiens related to CPSF subunits 74 kDa (RC74), mRNA P
AK300593.1 Homo sapiens cDNA FLJ53924 complete cds, highly similar to Homo sapiens related to CPSF subunits 74 kDa (RC74), mRNA P
AK298468.1 Homo sapiens cDNA FLJ51926 complete cds, highly similar to Homo sapiens related to CPSF subunits 74 kDa (RC74), mRNA P
AK295977.1 Homo sapiens cDNA FLJ54358 complete cds, highly similar to Homo sapiens related to CPSF subunits 74 kDa (RC74), mRNA P
NM_001145159.2 Homo sapiens integrator complex subunit 9 (INTS9), transcript variant 2, mRNA PA
NM_001172562.1 Homo sapiens integrator complex subunit 9 (INTS9), transcript variant 4, mRNA PA
NR_026826.2 Homo sapiens integrator complex subunit 9 (INTS9), transcript variant 3, non-coding RNA PA

EST sequences (10 of 266) [Show all sequences]

AA970849.1 Clone IMAGE:1572626 kidney 3' read A
AA985644.1 Clone IMAGE:1601270 lung 3' read A
AI129736.1 Clone IMAGE:1712114 uterus 3' read A
BX089585.1 Clone IMAGp998D111870_;_IMAGE:760282 embryonic tissue PA
AI262002.1 Clone IMAGE:1871326 intestine 3' read A
AI264560.1 Clone IMAGE:1874793 intestine 3' read A
CB157704.1 Clone L18POOL1n1-3-C02 liver 5' read P
AI309125.1 Clone IMAGE:1913952 kidney 3' read A
AI348062.1 Clone IMAGE:1927017 intestine 3' read A
AI468563.1 Clone IMAGE:2115276 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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