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UGID:155943     UniGene Hs.161031     Homo sapiens (human)   SYT8
Synaptotagmin VIII (SYT8)

Human protein-coding gene SYT8. Represented by 33 ESTs from 16 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_138567.3. [UniGene 155943 - Hs.161031]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612634.3 SYT8 gene product H. sapiens 100.0 400
NP_061272.2 Syt8 gene product M. musculus 79.3 392
NP_001087607.1 synaptotagmin 1 X. laevis 51.4 380
XP_698786.1 PREDICTED: synaptotagmin-1 D. rerio 49.7 386
NP_995619.1 synaptotagmin 1, isoform D D. melanogaster 48.8 246
NP_001022129.1 Protein SNT-1, isoform a C. elegans 46.7 184
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_001153153.1 PREDICTED: synaptotagmin-8 isoform 3 P. troglodytes 97.0 400
NP_001162376.1 synaptotagmin-8 P. anubis 91.8 157

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; lung; eye; mammary gland; brain; pancreas; liver; bladder
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.5
UniSTS entry: Chr 11 REN115913
UniSTS entry: Chr 11 REN115910
UniSTS entry: Chr 11 REN115916
UniSTS entry: Chr 11 REN115914
UniSTS entry: Chr 11 REN115917
UniSTS entry: Chr 11 REN115918
UniSTS entry: Chr 11 ECD05694
UniSTS entry: Chr 11 REN115909
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_138567.3 Homo sapiens synaptotagmin VIII (SYT8), mRNA P
AK293395.1 Homo sapiens cDNA FLJ57703 complete cds, highly similar to Synaptotagmin-8 P
BC144661.1 Homo sapiens cDNA clone IMAGE:9053192 P
BC144660.1 Homo sapiens cDNA clone IMAGE:9053191 P
BC144657.1 Homo sapiens cDNA clone IMAGE:9053188 P
BC144659.1 Homo sapiens cDNA clone IMAGE:9053190 P
BC038591.1 Homo sapiens synaptotagmin VIII, mRNA (cDNA clone IMAGE:5735067), with apparent retained intron PA

EST sequences (10 of 33) [Show all sequences]

R48637.1 Clone IMAGE:153902 mammary gland 5' read
BX282124.1 Clone IMAGp998L115983_;_IMAGE:2408218 lung P
CB321892.1 Clone UI-CF-FN0-aem-m-07-0-UI lung 3' read PA
AI814253.1 Clone IMAGE:2408218 lung 3' read PA
BX396540.2 Clone CS0DI018YH20 placenta 5' read P
BX399733.2 Clone CS0DI082YM01 placenta 3' read P
BX365067.2 Clone CS0DI046YB09 placenta 3' read P
BX365068.2 Clone CS0DI046YB09 placenta 5' read P
BX350282.2 Clone CS0DI082YM01 placenta 3' read P
BX378323.2 Clone CS0DI018YH20 placenta 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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