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UGID:150337     UniGene Hs.135229     Homo sapiens (human)   RBFOX3
RNA binding protein, fox-1 homolog (C. elegans) 3 (RBFOX3)

Human protein-coding gene RBFOX3. Represented by 114 ESTs from 34 cDNA libraries. Corresponds to reference sequence NM_001082575.1. [UniGene 150337 - Hs.135229]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001109611.2 PREDICTED: fox-1 homolog C-like M. mulatta 100.0 311
XP_003913576.1 PREDICTED: RNA binding protein fox-1 homolog 3 P. anubis 100.0 311
NP_001076044.1 RBFOX3 gene product H. sapiens 100.0 311
NP_001020102.2 Rbfox3 gene product M. musculus 96.8 312
XP_002664038.2 PREDICTED: RNA binding protein fox-1 homolog 3-like, partial D. rerio 91.7 323
NP_001106346.1 RNA binding protein, fox-1 homolog 2 X. laevis 71.0 362
NP_001097574.2 Ataxin-2 binding protein 1, isoform I D. melanogaster 68.1 210
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_001159532.3 PREDICTED: RNA binding protein fox-1 homolog 3 isoform 3 P. troglodytes 99.4 357
NP_001127970.1 fox-1 homolog C R. norvegicus 97.3 374

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; prostate; mixed; eye; testis; connective tissue; embryonic tissue; muscle; heart; uterus; uncharacterized tissue; intestine
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25.3
UniSTS entry: D11Bwg0517e
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 GDB:434012
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK128131.1 Homo sapiens cDNA FLJ46252 fis, clone TESTI4021821 P
AK124644.1 Homo sapiens cDNA FLJ42653 fis, clone BRACE3032983 P
BC093713.1 Homo sapiens hexaribonucleotide binding protein 3, mRNA (cDNA clone IMAGE:7939558), complete cds
NM_001082575.1 Homo sapiens RNA binding protein, fox-1 homolog (C. elegans) 3 (RBFOX3), mRNA PA
AK054893.1 Homo sapiens cDNA FLJ30331 fis, clone BRACE2007232
AK293905.1 Homo sapiens cDNA FLJ58356 complete cds P
AK293617.1 Homo sapiens cDNA FLJ56884 complete cds P

EST sequences (10 of 114) [Show all sequences]

AA994038.1 Clone IMAGE:1628975 mixed 3' read A
AI094391.1 Clone IMAGE:1692061 heart 3' read
AI126951.1 Clone IMAGE:1707921 heart 3' read A
AI127669.1 Clone IMAGE:1710325 uterus 3' read
CB047913.1 Clone IMAGE:3270698 prostate 5' read
CB049301.1 Clone IMAGE:3271532 prostate 3' read P
CB049302.1 Clone IMAGE:3271532 prostate 5' read P
BX110261.1 Clone IMAGp998B2017_;_IMAGE:53315 brain A
BX114146.1 Clone IMAGp998A104338_;_IMAGE:1707921 heart A
AI360087.1 Clone IMAGE:2019190 brain 3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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