NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:150337     UniGene Hs.135229     Homo sapiens (human)   RBFOX3
RNA binding protein, fox-1 homolog (C. elegans) 3 (RBFOX3)

Human protein-coding gene RBFOX3. Represented by 114 ESTs from 34 cDNA libraries. Corresponds to reference sequence NM_001082575.1. [UniGene 150337 - Hs.135229]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001109611.2 PREDICTED: fox-1 homolog C-like M. mulatta 100.0 311
XP_003913576.1 PREDICTED: RNA binding protein fox-1 homolog 3 P. anubis 100.0 311
NP_001076044.1 RBFOX3 gene product H. sapiens 100.0 311
NP_001020102.2 Rbfox3 gene product M. musculus 96.8 312
XP_002664038.2 PREDICTED: RNA binding protein fox-1 homolog 3-like, partial D. rerio 91.7 323
NP_001106346.1 RNA binding protein, fox-1 homolog 2 X. laevis 71.0 362
NP_001097574.2 Ataxin-2 binding protein 1, isoform I D. melanogaster 68.1 210
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_001159532.3 PREDICTED: RNA binding protein fox-1 homolog 3 isoform 3 P. troglodytes 99.4 357
NP_001127970.1 fox-1 homolog C R. norvegicus 97.3 374

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; prostate; mixed; eye; testis; connective tissue; embryonic tissue; muscle; heart; uterus; uncharacterized tissue; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25.3
UniSTS entry: D11Bwg0517e
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D11S3114
UniSTS entry: Chr 1 GDB:434012
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK128131.1 Homo sapiens cDNA FLJ46252 fis, clone TESTI4021821 P
AK124644.1 Homo sapiens cDNA FLJ42653 fis, clone BRACE3032983 P
BC093713.1 Homo sapiens hexaribonucleotide binding protein 3, mRNA (cDNA clone IMAGE:7939558), complete cds
NM_001082575.1 Homo sapiens RNA binding protein, fox-1 homolog (C. elegans) 3 (RBFOX3), mRNA PA
AK054893.1 Homo sapiens cDNA FLJ30331 fis, clone BRACE2007232
AK293905.1 Homo sapiens cDNA FLJ58356 complete cds P
AK293617.1 Homo sapiens cDNA FLJ56884 complete cds P

EST sequences (10 of 114) [Show all sequences]

AA994038.1 Clone IMAGE:1628975 mixed 3' read A
AI094391.1 Clone IMAGE:1692061 heart 3' read
AI126951.1 Clone IMAGE:1707921 heart 3' read A
AI127669.1 Clone IMAGE:1710325 uterus 3' read
CB047913.1 Clone IMAGE:3270698 prostate 5' read
CB049301.1 Clone IMAGE:3271532 prostate 3' read P
CB049302.1 Clone IMAGE:3271532 prostate 5' read P
BX110261.1 Clone IMAGp998B2017_;_IMAGE:53315 brain A
BX114146.1 Clone IMAGp998A104338_;_IMAGE:1707921 heart A
AI360087.1 Clone IMAGE:2019190 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help