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UGID:150195     UniGene Hs.134726     Homo sapiens (human)   SKA1
Spindle and kinetochore associated complex subunit 1 (SKA1)

Human protein-coding gene SKA1. Represented by 125 ESTs from 61 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 150195 - Hs.134726]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_512132.2 PREDICTED: spindle and kinetochore-associated protein 1 isoform 2 P. troglodytes 100.0 254
NP_659497.1 SKA1 gene product H. sapiens 100.0 254
NP_079857.3 spindle and kinetochore-associated protein 1 M. musculus 79.0 251
NP_001002592.1 ska1 gene product D. rerio 54.5 257
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_003914428.1 PREDICTED: spindle and kinetochore-associated protein 1, partial P. anubis 96.7 149
XP_001093574.1 PREDICTED: spindle and kinetochore-associated protein 1 isoform 1 M. mulatta 96.5 254

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; blood; prostate; pharynx; bone marrow; uterus; brain; lung; adrenal gland; vascular; salivary gland; lymph; liver; mixed; placenta; testis; cervix; intestine; eye; embryonic tissue; kidney; ovary; thymus; skin; mammary gland; lymph node; tonsil; pancreas
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q21.1
UniSTS entry: Chr 18 D18S1311 [Map Viewer]
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 GDB:434012
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_001039535.2 Homo sapiens spindle and kinetochore associated complex subunit 1 (SKA1), transcript variant 1, mRNA PA
BC015606.2 Homo sapiens chromosome 18 open reading frame 24, mRNA (cDNA clone IMAGE:4761969), partial cds A
AK313968.1 Homo sapiens cDNA, FLJ94615 P
NM_145060.3 Homo sapiens spindle and kinetochore associated complex subunit 1 (SKA1), transcript variant 2, mRNA PA
AK303464.1 Homo sapiens cDNA FLJ52985 complete cds P
BC005972.1 Homo sapiens cDNA clone IMAGE:4094587 A

EST sequences (10 of 125) [Show all sequences]

AI089015.1 Clone IMAGE:1634933 mixed 3' read A
AI168606.1 Clone IMAGE:1656044 mixed 3' read A
AI183401.1 Clone IMAGE:1724621 placenta 3' read A
AI193377.1 Clone IMAGE:1743140 lung 3' read A
AI086467.1 Clone IMAGE:1751090 brain 3' read
AI278516.1 Clone IMAGE:1893132 placenta 3' read A
AI298342.1 Clone IMAGE:1895244 placenta 3' read A
AI393122.1 Clone IMAGE:2111319 mixed 3' read A
AI499094.1 Clone IMAGE:2178077 uterus 3' read
AI572228.1 Clone IMAGE:2088981 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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