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UGID:147900     UniGene Hs.127950     Homo sapiens (human)   BRD1
Bromodomain containing 1 (BRD1)

Human protein-coding gene BRD1. Represented by 181 ESTs from 96 cDNA libraries. Corresponds to reference sequence NM_014577.1. [UniGene 147900 - Hs.127950]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055392.1 BRD1 gene product H. sapiens 100.0 1057
XP_001139189.2 PREDICTED: bromodomain-containing protein 1 isoform 1 P. troglodytes 99.8 1059
NP_001028446.2 bromodomain containing 1 M. musculus 97.3 1188
NP_001085846.1 bromodomain containing 1 X. laevis 84.6 1054
XP_698063.4 PREDICTED: bromodomain-containing protein 1 D. rerio 71.1 1140
NP_610266.1 Br140 D. melanogaster 58.9 700
NP_015356.1 Nto1p S. cerevisiae 55.6 180
XP_956156.1 hypothetical protein NCU00045 N. crassa 51.8 257
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
XP_003905772.1 PREDICTED: bromodomain-containing protein 1 isoform 1 P. anubis 99.3 1188
XP_001111383.1 PREDICTED: bromodomain-containing protein 1-like isoform 3 M. mulatta 99.2 1189

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; uncharacterized tissue; mixed; nerve; stomach; placenta; mouth; prostate; eye; uterus; embryonic tissue; mammary gland; ovary; intestine; esophagus; spleen; thymus; epididymis; thyroid; bone; larynx; bladder; skin; liver; trachea; pancreas; lymph node; lung; kidney; heart; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.33
UniSTS entry: Chr 22 WI-14811 [Map Viewer]
UniSTS entry: Chr 22 G49348
UniSTS entry: Chr 22 G49315
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AL049402.1 Homo sapiens mRNA; cDNA DKFZp586E1619 (from clone DKFZp586E1619) A
BC047508.1 Homo sapiens bromodomain containing 1, mRNA (cDNA clone MGC:48300 IMAGE:5267185), complete cds PA
AL080149.1 Homo sapiens mRNA; cDNA DKFZp434B094 (from clone DKFZp434B094) PA
BX640795.1 Homo sapiens mRNA; cDNA DKFZp686N1932 (from clone DKFZp686N1932) P
BC030007.1 Homo sapiens bromodomain containing 1, mRNA (cDNA clone MGC:26199 IMAGE:4826181), complete cds PA
CR456408.1 Homo sapiens BRD1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.BRD1) P
AF005067.1 Homo sapiens BRL mRNA, complete cds PA
CR936643.1 Homo sapiens mRNA; cDNA DKFZp686F0325 (from clone DKFZp686F0325) PA
AB209216.1 Homo sapiens mRNA for bromodomain containing protein 1 variant protein P
NM_014577.1 Homo sapiens bromodomain containing 1 (BRD1), mRNA PA
BC131583.1 Homo sapiens cDNA clone IMAGE:40112705 P
AK292428.1 Homo sapiens cDNA FLJ75275 complete cds, highly similar to Homo sapiens bromodomain containing 1, mRNA P
AK304776.1 Homo sapiens cDNA FLJ61578 complete cds, highly similar to Bromodomain-containing protein 1 PA
AK302845.1 Homo sapiens cDNA FLJ51161 complete cds, highly similar to Bromodomain-containing protein 1 P
AK302736.1 Homo sapiens cDNA FLJ51158 complete cds, highly similar to Bromodomain-containing protein 1 P
AK304330.1 Homo sapiens cDNA FLJ51191 complete cds, highly similar to Bromodomain-containing protein 1 P

EST sequences (10 of 181) [Show all sequences]

AA969405.1 Clone IMAGE:1580527 mixed 3' read P
AA983778.1 Clone IMAGE:1580912 mixed 3' read
AI061156.1 Clone IMAGE:1699672 kidney 3' read A
BX092061.1 Clone IMAGp998M22275_;_IMAGE:47209 brain A
T07017.1 Clone HFBEC39 brain
R15493.1 Clone c947-f heart
AI382555.1 Clone IMAGE:2020444 brain 3' read P
AI497969.1 Clone IMAGE:2166102 brain 3' read A
AI563978.1 Clone IMAGE:2169397 brain 3' read P
AI680322.1 Clone IMAGE:2264277 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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