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UGID:147222     UniGene Hs.126057     Homo sapiens (human)   FRAT1
Frequently rearranged in advanced T-cell lymphomas (FRAT1)

Human protein-coding gene FRAT1. Represented by 42 ESTs from 26 cDNA libraries. Corresponds to reference sequence NM_005479.3. [UniGene 147222 - Hs.126057]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005470.2 proto-oncogene FRAT1 H. sapiens 100.0 278
NP_032069.2 proto-oncogene FRAT1 M. musculus 83.6 273
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_521571.1 PREDICTED: proto-oncogene FRAT1 P. troglodytes 99.3 278
XP_001101995.1 PREDICTED: proto-oncogene FRAT1 M. mulatta 97.8 278

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; prostate; pituitary gland; intestine; cervix; ovary; lung; blood; testis; placenta; uncharacterized tissue; spleen; connective tissue; salivary gland; bone; mammary gland; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q24.1
UniSTS entry: Chr 10 RH71241
UniSTS entry: Chr 10 RH99329
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_005479.3 Homo sapiens frequently rearranged in advanced T-cell lymphomas (FRAT1), mRNA P
AK307245.1 Homo sapiens cDNA, FLJ97193 P
AB074890.1 Homo sapiens FRAT1 mRNA for GSK-3beta binding protein FRAT1, complete cds P
BC034476.1 Homo sapiens frequently rearranged in advanced T-cell lymphomas, mRNA (cDNA clone MGC:26295 IMAGE:4823463), complete cds PA
U58975.2 Homo sapiens proto-oncogene (FRAT1) mRNA, complete cds P

EST sequences (10 of 42) [Show all sequences]

AA906070.1 Clone IMAGE:1505612 mixed 3' read A
BX089494.1 Clone IMAGp998A121999_;_IMAGE:809747 ovary
AI457511.1 Clone IMAGE:2150438 lung 3' read A
AI470157.1 Clone IMAGE:2148879 mixed 3' read
AI652791.1 Clone IMAGE:2310289 uncharacterized tissue 3' read A
AI742864.1 Clone IMAGE:2368221 mixed 3' read P
AI761616.1 Clone IMAGE:2370090 mixed 3' read P
AI804897.1 Clone IMAGE:2249344 prostate 3' read A
AI808378.1 Clone IMAGE:2363219 mixed 3' read P
CB995777.1 Clone IMAGE:30332452 placenta 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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