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UGID:145621     UniGene Hs.120316     Homo sapiens (human)   CABS1
Calcium-binding protein, spermatid-specific 1 (CABS1)

Human protein-coding gene CABS1. Represented by 110 ESTs from 11 cDNA libraries. EST representation biased toward testis; normal; fetus. Corresponds to reference sequence NM_033122.3. [UniGene 145621 - Hs.120316]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_149113.3 CABS1 gene product H. sapiens 100.0 394
NP_081907.1 Cabs1 gene product M. musculus 65.2 390
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_517252.1 PREDICTED: calcium-binding and spermatid-specific protein 1 P. troglodytes 99.5 394
XP_003898855.1 PREDICTED: calcium-binding and spermatid-specific protein 1 P. anubis 94.7 395

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
normal [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q13.3
UniSTS entry: Chr 4 RH102183
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC046111.1 Homo sapiens chromosome 4 open reading frame 35, mRNA (cDNA clone MGC:57543 IMAGE:5171504), complete cds PA
AF380838.1 Homo sapiens testis development protein NYD-SP26 mRNA, complete cds PA
NM_033122.3 Homo sapiens calcium-binding protein, spermatid-specific 1 (CABS1), mRNA PA
AK057459.1 Homo sapiens cDNA FLJ32897 fis, clone TESTI2005268, moderately similar to Rattus norvegicus RSD-6 mRNA P
AK315022.1 Homo sapiens cDNA, FLJ95957, highly similar to Homo sapiens testis development protein NYD-SP26 (NYD-SP26), mRNA P
BC034492.1 Homo sapiens chromosome 4 open reading frame 35, mRNA (cDNA clone IMAGE:4829810), containing frame-shift errors PA

EST sequences (10 of 110) [Show all sequences]

AA927638.1 Clone IMAGE:1541523 mixed 3' read A
AI004036.1 Clone IMAGE:1625970 mixed 3' read A
AI082850.1 Clone IMAGE:1638264 testis 3' read A
BX098854.1 Clone IMAGp998C224407_;_IMAGE:1734477 testis A
AI188203.1 Clone IMAGE:1734477 testis 3' read A
AI214833.1 Clone IMAGE:1840058 testis 3' read A
AI285864.1 Clone IMAGE:1854846 mixed 3' read A
AI476362.1 Clone IMAGE:2157229 mixed 3' read A
AI476508.1 Clone IMAGE:2157315 mixed 3' read A
AI827496.1 Clone IMAGE:2349498 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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