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UGID:144640     UniGene Hs.115232     Homo sapiens (human)   SF3A2
Splicing factor 3a, subunit 2, 66kDa (SF3A2)

Human protein-coding gene SF3A2. Represented by 375 ESTs from 136 cDNA libraries. Corresponds to reference sequence NM_007165.4. [UniGene 144640 - Hs.115232]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001150618.1 PREDICTED: splicing factor 3A subunit 2 isoform 4 P. troglodytes 100.0 463
NP_009096.2 SF3A2 gene product H. sapiens 100.0 463
XP_001519977.1 PREDICTED: splicing factor 3A subunit 2-like, partial O. anatinus 99.5 204
NP_038679.3 Sf3a2 gene product M. musculus 96.9 484
NP_957337.1 sf3a2 gene product D. rerio 95.3 277
NP_001080140.1 splicing factor 3a, subunit 2, 66kDa X. laevis 90.1 404
NP_648603.1 CG10754 D. melanogaster 87.1 263
NP_502290.1 Protein REPO-1 C. elegans 82.4 221
NP_565747.1 splicing factor 3A subunit 2 A. thaliana 72.5 275
XP_001696401.1 splicing factor 3a, subunit 2 C. reinhardtii 67.8 286
XP_962153.1 hypothetical protein NCU07299 N. crassa 64.9 245
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_003123077.3 PREDICTED: splicing factor 3A subunit 2-like S. scrofa 99.0 203
XP_004023503.1 PREDICTED: LOW QUALITY PROTEIN: splicing factor 3A subunit 2 O. aries 98.0 450

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; embryonic tissue; skin; eye; uterus; placenta; intestine; lymph; blood; bone; thymus; tonsil; mixed; muscle; lymph node; stomach; lung; testis; mammary gland; prostate; cervix; ovary; pancreas; adrenal gland; kidney; liver; spleen; nerve; thyroid; vascular; bone marrow; ganglia; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 1 GDB:182516
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_007165.4 Homo sapiens splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA PA
BC004434.1 Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:3975 IMAGE:2820900), complete cds PA
BC009903.2 Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone MGC:2362 IMAGE:2959124), complete cds PA
AK314815.1 Homo sapiens cDNA, FLJ95692, Homo sapiens splicing factor 3a, subunit 2, 66kDa (SF3A2), mRNA P
BC015804.1 Homo sapiens splicing factor 3a, subunit 2, 66kDa, mRNA (cDNA clone IMAGE:3906524), partial cds PA

EST sequences (10 of 375) [Show all sequences]

BX114140.1 Clone IMAGp998L061748_;_IMAGE:713621 ovary A
AI280056.1 Clone IMAGE:1977006 brain 3' read PA
AI348200.1 Clone IMAGE:1927139 intestine 3' read P
AI357004.1 Clone IMAGE:2001417 lymph node 3' read A
AI580259.1 Clone IMAGE:2215241 ovary 3' read PA
AI702367.1 Clone IMAGE:2293559 pancreas 3' read P
AI702383.1 Clone IMAGE:2293583 pancreas 3' read
AI801472.1 Clone IMAGE:2185506 stomach 3' read A
BX283381.1 Clone IMAGp958F041886_;_IMAGE:5424771 eye P
AI833211.1 Clone IMAGE:2377906 intestine 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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