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UGID:144166     UniGene Hs.112195     Homo sapiens (human)   CPT1C
Carnitine palmitoyltransferase 1C (CPT1C)

Human protein-coding gene CPT1C. Represented by 121 ESTs from 71 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 144166 - Hs.112195]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689572.1 CPT1C gene product H. sapiens 100.0 802
NP_710146.1 Cpt1c gene product M. musculus 87.3 797
NP_001079706.1 carnitine palmitoyltransferase 1A (liver) X. laevis 61.8 766
XP_002666893.2 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform D. rerio 58.6 768
NP_001163111.1 withered, isoform C D. melanogaster 51.6 646
NP_496721.2 Protein CPT-1 C. elegans 48.9 617
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_003915963.1 PREDICTED: carnitine O-palmitoyltransferase 1, brain isoform isoform 1 P. anubis 98.9 802
XP_003638864.1 PREDICTED: carnitine O-palmitoyltransferase 1, brain isoform-like isoform 1 C. lupus familiaris 94.3 802

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mixed; eye; heart; uterus; kidney; placenta; testis; uncharacterized tissue; prostate; pineal gland; intestine; lung; nerve; skin; connective tissue; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.33
UniSTS entry: Chr 19 SHGC-30929 [Map Viewer]
UniSTS entry: Chr 19 RH78656 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK290092.1 Homo sapiens cDNA FLJ78699 complete cds, highly similar to Homo sapiens carnitine palmitoyltransferase 1C (CPT1C), mRNA P
AK289713.1 Homo sapiens cDNA FLJ75003 complete cds, highly similar to Homo sapiens carnitine palmitoyltransferase IC mRNA PA
AK074389.1 Homo sapiens cDNA FLJ23809 fis, clone HRC06614 PA
BC029104.1 Homo sapiens carnitine palmitoyltransferase 1C, mRNA (cDNA clone MGC:9391 IMAGE:3872727), complete cds PA
AK096516.1 Homo sapiens cDNA FLJ39197 fis, clone OCBBF2005077, highly similar to Carnitine O-palmitoyltransferase I, brain isoform (EC 2.3.1.21) P
AL831876.1 Homo sapiens mRNA; cDNA DKFZp547H1310 (from clone DKFZp547H1310) PA
AK299866.1 Homo sapiens cDNA FLJ60346 complete cds, highly similar to Carnitine O-palmitoyltransferase I, brain isoform (EC 2.3.1.21) P
NM_001136052.2 Homo sapiens carnitine palmitoyltransferase 1C (CPT1C), transcript variant 1, mRNA PA
NM_152359.2 Homo sapiens carnitine palmitoyltransferase 1C (CPT1C), transcript variant 2, mRNA PA
AF357970.1 Homo sapiens carnitine palmitoyltransferase IC mRNA, complete cds PA
NM_001199753.1 Homo sapiens carnitine palmitoyltransferase 1C (CPT1C), transcript variant 4, mRNA PA
NM_001199752.1 Homo sapiens carnitine palmitoyltransferase 1C (CPT1C), transcript variant 3, mRNA PA

EST sequences (10 of 121) [Show all sequences]

AI079938.1 Clone IMAGE:1677256 mixed 3' read PA
AI150935.1 Clone IMAGE:1703828 brain 3' read PA
BX092378.1 Clone IMAGp998L161203_;_IMAGE:504351 uterus
AI299133.1 Clone IMAGE:1898279 lung 3' read PA
AI360422.1 Clone IMAGE:2019249 brain 3' read PA
AI751611.1 Clone NHTBC_cn10h11 bone P
BX281684.1 Clone IMAGp998H0811472_;_IMAGE:5189047 mixed P
CD104328.1 Clone IMAGE:30371708 mixed 5' read
BX394025.2 Clone CS0DC008YC16 uncharacterized tissue 5' read P
BX354104.2 Clone CS0DC014YN12 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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