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UGID:144040     UniGene Hs.110675     Homo sapiens (human)   APOC1
Apolipoprotein C-I (APOC1)

Human protein-coding gene APOC1. Represented by 247 ESTs from 94 cDNA libraries. Corresponds to reference sequence NM_001645.3. [UniGene 144040 - Hs.110675]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001636.1 APOC1 gene product H. sapiens 100.0 82
Other hits (SpeciesId(%)Len(aa)
XP_001148061.1 PREDICTED: apolipoprotein C-I, basic form isoform 1 P. troglodytes 98.8 82

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; mixed; uncharacterized tissue; brain; lung; kidney; esophagus; lymph node; adrenal gland; embryonic tissue; heart; ovary; placenta; pancreas; prostate; bone marrow; connective tissue; salivary gland; eye; mammary gland; intestine; pharynx; testis; muscle; epididymis; thymus; pineal gland; thyroid; stomach; vascular; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.2
UniSTS entry: Chr 19 PMC164795P2
UniSTS entry: Chr 1 GDB:434012
UniSTS entry: Chr 1 GDB:335751
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 D5S1597E
UniSTS entry: Chr 1 RH80031
UniSTS entry: Chr 1 L17809
UniSTS entry: Chr 1 L18426
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BT007142.1 Homo sapiens apolipoprotein C-I mRNA, complete cds P
AJ249921.1 Homo sapiens intergenic region between apoE and apoCI genes
BC055093.1 Homo sapiens apolipoprotein C-I, mRNA (cDNA clone MGC:62029 IMAGE:6567705), complete cds PA
NM_001645.3 Homo sapiens apolipoprotein C-I (APOC1), mRNA P
M27359.1 Human apolipoprotein CI (apoCI) mRNA, partial cdn
CR456907.1 Homo sapiens full open reading frame cDNA clone RZPDo834A067D for gene APOC1, apolipoprotein C-I; complete cds, incl. stopcodon P
AK225971.1 Homo sapiens mRNA for apolipoprotein C-I precursor variant, clone: FCC113A12 PA
X00570.1 Human mRNA for precursor of apolipoprotein CI (apo CI) P
BC009698.2 Homo sapiens apolipoprotein C-I, mRNA (cDNA clone MGC:9245 IMAGE:3889900), complete cds PA
AK312036.1 Homo sapiens cDNA, FLJ92313, Homo sapiens apolipoprotein C-I (APOC1), mRNA P

EST sequences (10 of 247) [Show all sequences]

AA954298.1 Clone IMAGE:1562267 mixed 3' read PA
AA972388.1 Clone IMAGE:1584095 mixed 3' read A
AA976340.1 Clone IMAGE:1589589 kidney 3' read
AA976838.1 Clone IMAGE:1588342 uncharacterized tissue 3' read PA
AA983709.1 Clone IMAGE:1557614 lung 3' read P
AA991590.1 Clone IMAGE:1609752 mammary gland 3' read A
AA902760.1 Clone IMAGE:1519119 uncharacterized tissue 3' read A
AA906944.1 Clone IMAGE:1521687 lung 3' read
AI041750.1 Clone IMAGE:1660437 mixed 3' read A
AI051578.1 Clone IMAGE:1673779 mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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