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UGID:143961     UniGene Hs.109590     Homo sapiens (human)   STBD1
Starch binding domain 1 (STBD1)

Human protein-coding gene STBD1. Represented by 185 ESTs from 104 cDNA libraries. Corresponds to reference sequence NM_003943.4. [UniGene 143961 - Hs.109590]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003934.1 STBD1 gene product H. sapiens 100.0 357
NP_780305.1 Stbd1 gene product M. musculus 71.9 337
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_003310378.1 PREDICTED: starch-binding domain-containing protein 1 P. troglodytes 98.9 357
XP_003898781.1 PREDICTED: starch-binding domain-containing protein 1 P. anubis 96.9 357

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; testis; muscle; uncharacterized tissue; heart; brain; kidney; skin; umbilical cord; adipose tissue; ovary; thyroid; bladder; connective tissue; placenta; mammary gland; mouth; liver; intestine; uterus; blood; lung; prostate; pancreas; ascites; nerve; bone; embryonic tissue; eye; cervix; bone marrow; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q21.1
UniSTS entry: Chr 4 SHGC-133062
UniSTS entry: Chr 4 SHGC-63500
UniSTS entry: Chr 4 D4S2479E
UniSTS entry: Chr 4 WI-17734 [Map Viewer]
UniSTS entry: Chr 4 SHGC-63501
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AF062534.1 Homo sapiens genethonin 1 mRNA, complete cds PA
AK123795.1 Homo sapiens cDNA FLJ41801 fis, clone NHNPC2001931, highly similar to Genethonin-1 P
NM_003943.4 Homo sapiens starch binding domain 1 (STBD1), mRNA PA
AK002155.1 Homo sapiens cDNA FLJ11293 fis, clone PLACE1009670, highly similar to Genethonin-1 P
BC022301.1 Homo sapiens starch binding domain 1, mRNA (cDNA clone MGC:22536 IMAGE:4694574), complete cds PA

EST sequences (10 of 185) [Show all sequences]

AA994995.1 Clone IMAGE:1625760 mixed 3' read A
AA948136.1 Clone IMAGE:1560207 intestine 3' read A
AI033501.1 Clone IMAGE:1655537 mixed 3' read
AI033727.1 Clone IMAGE:1663475 skin 3' read A
AI079231.1 Clone IMAGE:1678933 skin 3' read A
AI089722.1 Clone IMAGE:1686839 brain 3' read A
AI149301.1 Clone IMAGE:1715139 placenta 3' read A
BX108611.1 Clone IMAGp998L111119 uterus 5' read P
AI186782.1 Clone IMAGE:1745328 lung 3' read A
CB157184.1 Clone L17N670205n1-7-D03 liver 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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