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UGID:143366     UniGene Hs.104777     Homo sapiens (human)   ODF3L2
Outer dense fiber of sperm tails 3-like 2 (ODF3L2)

Human protein-coding gene ODF3L2. Represented by 25 ESTs from 7 cDNA libraries. EST representation biased toward testis; colorectal tumor. Corresponds to reference sequence NM_182577.2. [UniGene 143366 - Hs.104777]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_872383.1 ODF3L2 gene product H. sapiens 100.0 288
NP_001028645.1 Odf3l2 gene product M. musculus 84.0 275
NP_001124142.1 odf3l2 gene product D. rerio 50.0 228
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001161465.1 PREDICTED: outer dense fiber protein 3-like protein 2-like, partial P. troglodytes 99.4 171
XP_001117022.1 PREDICTED: outer dense fiber protein 3-like protein 2-like M. mulatta 99.2 117

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
colorectal tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; intestine; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13.3
UniSTS entry: Chr 19 RH92814
UniSTS entry: Chr 19 C19orf19
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_182577.2 Homo sapiens outer dense fiber of sperm tails 3-like 2 (ODF3L2), mRNA PA
BC104469.1 Homo sapiens outer dense fiber of sperm tails 3-like 2, mRNA (cDNA clone MGC:129963 IMAGE:40032432), complete cds P
BC104468.1 Homo sapiens outer dense fiber of sperm tails 3-like 2, mRNA (cDNA clone MGC:129962 IMAGE:40032428), complete cds P
AK097378.1 Homo sapiens cDNA FLJ40059 fis, clone TCOLN2000139 P

EST sequences (10 of 25) [Show all sequences]

AI142327.1 Clone IMAGE:1839874 testis 5' read
AI147318.1 Clone IMAGE:1839874 testis 3' read A
BX111073.1 Clone IMAGp998K114500_;_IMAGE:1839874 testis
AI936500.1 Clone IMAGE:2329485 mixed 3' read A
AW082140.1 Clone IMAGE:2580947 mixed 3' read A
DB009323.1 Clone TCOLN2000139 intestine 5' read P
DB335305.1 Clone TCOLN2000139 intestine 3' read A
DB069184.1 Clone TESTI4011351 testis 5' read P
DB445202.1 Clone H013019D02 testis 5' read
BI465095.1 Clone IMAGE:5273546 testis 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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