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UGID:519785     UniGene Gga.5444     Gallus gallus (chicken)   BDH1
3-hydroxybutyrate dehydrogenase, type 1 (BDH1)

Chicken protein-coding gene BDH1. Represented by 57 ESTs from 33 cDNA libraries. EST representation biased toward juvenile. Corresponds to reference sequence NM_001006547.1. [UniGene 519785 - Gga.5444]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001006547.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor G. gallus 100.0 338
NP_780386.3 D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor M. musculus 80.2 342
NP_004042.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor H. sapiens 80.1 342
NP_001082978.1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial D. rerio 65.3 288
NP_001090337.1 retinol dehydrogenase 9 precursor X. laevis 47.8 276
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003209148.1 PREDICTED: d-beta-hydroxybutyrate dehydrogenase, mitochondrial-like M. gallopavo 99.4 342
XP_002188146.1 PREDICTED: 3-hydroxybutyrate dehydrogenase T. guttata 95.9 342

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bursa of Fabricius; mixed; other; brain; thymus; spleen; embryonic tissue; liver; small intestine; limb; heart; uncharacterized tissue; epiphyseal growth plate; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BX929578.1 Gallus gallus finished cDNA, clone ChEST738c17 P
CR353138.1 Gallus gallus finished cDNA, clone ChEST821e19 P
AJ720289.1 Gallus gallus mRNA for hypothetical protein, clone 14d17 PA
NM_001006547.1 Gallus gallus 3-hydroxybutyrate dehydrogenase, type 1 (BDH1), nuclear gene encoding mitochondrial protein, mRNA PA

EST sequences (10 of 57) [Show all sequences]

BX259723.2 Clone gcag0003c.e.19 mixed 3' read A
BX259724.3 Clone gcag0003c.e.19 mixed 5' read
BX263829.3 Clone gcal0009.a.06 mixed 3' read A
BX263830.4 Clone gcal0009.a.06 mixed 5' read
BX271000.3 Clone gcal0002.l.14 mixed 3' read A
BX271901.2 Clone gcal0002.l.14 mixed 5' read
CD727549.1 Clone 1GAL_62F13 other 5' read P
CD730978.1 Clone 1GAL_12L17 other 5' read
CD733708.1 Clone 1GAL_50O18 other 5' read
CD727826.1 Clone 1GAL_63K21 other 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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