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UGID:106219     UniGene Dr.10452     Danio rerio (zebrafish)   mapk1
Mitogen-activated protein kinase 1 (mapk1)

Zebrafish protein-coding gene mapk1. Represented by 41 ESTs from 22 cDNA libraries. Corresponds to reference sequence NM_182888.2. [UniGene 106219 - Dr.10452]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_878308.2 mitogen-activated protein kinase 1 D. rerio 100.0 368
NP_001083548.1 mitogen-activated protein kinase 1 X. laevis 96.9 359
NP_620407.1 mitogen-activated protein kinase 1 H. sapiens 96.4 359
NP_036079.1 mitogen-activated protein kinase 1 M. musculus 96.3 351
NP_001104349.1 rolled, isoform E D. melanogaster 88.1 370
NP_001022583.1 Protein MPK-1, isoform a C. elegans 85.7 342
XP_959713.2 mitogen-activated kinase-2 N. crassa 63.4 346
XP_001690850.1 mitogen-activated protein kinase 6 C. reinhardtii 56.5 345
NP_011554.1 Kss1p S. cerevisiae 56.1 362
NP_172492.1 mitogen-activated protein kinase 1 A. thaliana 55.8 360
Other hits (2 of 62) [Show all]SpeciesId(%)Len(aa)
XP_003444522.1 PREDICTED: mitogen-activated protein kinase 1-like O. niloticus 98.6 368
XP_002195615.1 PREDICTED: mitogen-activated protein kinase 1 T. guttata 97.5 275

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: whole body; brain; kidney; olfactory rosettes; reproductive system; mixed; skin; muscle; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC050169.1 Danio rerio mitogen-activated protein kinase 1, mRNA (cDNA clone MGC:56570 IMAGE:5914838), complete cds PA
AB030903.1 Danio rerio mRNA for ERK2, complete cds PA
NM_182888.2 Danio rerio mitogen-activated protein kinase 1 (mapk1), mRNA PA
BC065868.1 Danio rerio mitogen-activated protein kinase 1, mRNA (cDNA clone MGC:77792 IMAGE:7001276), complete cds PA
AY922320.1 Danio rerio extracellular signal-regulated kinase 2 mRNA, complete cds P

EST sequences (10 of 41) [Show all sequences]

BG799750.1 Clone IMAGE:4729492 kidney 5' read P
BI866241.1 Clone IMAGE:4834158 brain 3' read P
BI839722.1 Clone IMAGE:4834158 brain 5' read P
BG883667.1 Clone IMAGE:4729492 kidney 3' read P
BQ258428.1 Clone IMAGE:5914838 whole body 5' read P
AL909691.1 Clone 106-G08-1 whole body P
AL909692.1 Clone 145-F04-1 whole body P
AL909693.1 Clone 014-G12-1 whole body P
AL909694.1 Clone 046-E08-1 whole body
CD281023.1 Clone IMAGE:6320716 whole body 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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