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UGID:2440927     UniGene Dr.79653     Danio rerio (zebrafish)   sfxn4
Sideroflexin 4 (sfxn4)

Zebrafish protein-coding gene sfxn4. Represented by 22 ESTs from 11 cDNA libraries. EST representation biased toward larval. Corresponds to reference sequence NM_001076662.1. [UniGene 2440927 - Dr.79653]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001070130.1 sideroflexin-4 D. rerio 100.0 315
Other hits (2 of 6) [Show all]SpeciesId(%)Len(aa)
NP_001133401.1 sideroflexin-4 S. salar 61.8 316
XP_003441280.1 PREDICTED: sideroflexin-4-like O. niloticus 58.9 315

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: larval [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: whole body; uncharacterized tissue; mixed; brain; muscle; reproductive system; olfactory rosettes
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
UniSTS entry: fd24b03.y1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

BC124271.1 Danio rerio sideroflexin 4, mRNA (cDNA clone MGC:153199 IMAGE:7428964), complete cds PA
NM_001076662.1 Danio rerio sideroflexin 4 (sfxn4), mRNA PA

EST sequences (10 of 22) [Show all sequences]

AI959069.1 mixed 5' read P
CK397645.1 Clone IMAGE:7118858 brain 5' read P
CK688290.1 Clone IMAGE:7151335 whole body 5' read P
CK691444.1 Clone IMAGE:7155313 whole body 5' read P
CO923213.1 Clone IMAGE:7428964 whole body 5' read P
CV488926.1 Clone IMAGE:7452845 whole body 3' read PA
CV488951.1 Clone IMAGE:7452845 whole body 5' read P
DV599066.1 Clone IMAGE:8148301 olfactory rosettes 5' read P
CT589006.2 Clone ZF_mu_58g21 muscle 3' read PA
CT615632.2 Clone ZF_mu_30e03 muscle 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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