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UGID:2436871     UniGene Dr.75597     Danio rerio (zebrafish)   pmelb
Premelanosome protein b (pmelb)

Zebrafish protein-coding gene pmelb. Represented by 19 ESTs from 11 cDNA libraries. Corresponds to reference sequence NM_001033918.2. [UniGene 2436871 - Dr.75597]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001029090.2 melanocyte protein Pmel 17 precursor D. rerio 100.0 615
NP_001191022.1 premelanosome protein precursor X. laevis 45.9 653
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_003457123.1 PREDICTED: melanocyte protein PMEL-like O. niloticus 58.8 587
XP_003223287.1 PREDICTED: melanocyte protein PMEL-like A. carolinensis 49.6 669

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: eye; whole body; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 23
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AY864065.1 Danio rerio melanosome matrix protein (silverb) mRNA, complete cds P
NM_001033918.2 Danio rerio premelanosome protein b (pmelb), mRNA PA
BC116462.1 Danio rerio silver homolog (mouse) b, mRNA (cDNA clone MGC:136221 IMAGE:7280740), complete cds PA

EST sequences (10 of 19) [Show all sequences]

AA566300.1 Clone ZF-E385 whole body 5' read P
BG305033.1 Clone IMAGE:4144371 eye 5' read P
BG306451.1 Clone IMAGE:4199371 eye 3' read PA
BG308048.1 Clone IMAGE:4199371 eye 5' read P
BI706384.1 Clone IMAGE:4790405 eye 5' read P
AL927251.1 Clone 186-F08-2 whole body P
CB351926.1 Clone IMAGE:6891818 whole body 5' read P
CK689269.1 Clone IMAGE:7152383 whole body 5' read P
CK705009.1 Clone IMAGE:7137462 whole body 3' read P
CN500732.1 Clone IMAGE:7280740 eye 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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