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UGID:2553491     UniGene Dr.105054     Danio rerio (zebrafish)   alcamb
Activated leukocyte cell adhesion molecule b (alcamb)

Zebrafish protein-coding gene alcamb. Represented by 126 ESTs from 25 cDNA libraries. EST representation biased toward gastrula. Corresponds to reference sequence NM_212634.3. [UniGene 2553491 - Dr.105054]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_997799.3 neurolin-like cell adhesion molecule precursor D. rerio 100.0 561
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
NP_001092127.1 neurolin-b precursor T. rubripes 56.5 571
XP_003460077.1 PREDICTED: CD166 antigen homolog A-like O. niloticus 49.0 529

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: gastrula [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; whole body; mixed; inner ear; reproductive system; eye; olfactory rosettes; uncharacterized tissue; gills; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
UniSTS entry: fc14b01.x1
UniSTS entry: fb53h09.x1
UniSTS entry: fb80a10.x1
UniSTS entry: fb80a10.x1
UniSTS entry: AI497463
UniSTS entry: Ndufb11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AY050561.1 Danio rerio neurolin-like cell adhesion molecule (nlcam) mRNA, complete cds PA
NM_212634.3 Danio rerio activated leukocyte cell adhesion molecule b (alcamb), mRNA PA
DQ279080.1 Danio rerio neurolin-b mRNA, complete cds P
CU458936.1 Danio rerio cDNA, clone cssl:d0176 PA
CU458904.1 Danio rerio cDNA, clone cssl:d0131 P
BC163486.1 Danio rerio neurolin-like cell adhesion molecule, mRNA (cDNA clone MGC:195006 IMAGE:9038509), complete cds P
BC163458.1 Danio rerio neurolin-like cell adhesion molecule, mRNA (cDNA clone MGC:194978 IMAGE:9038511), complete cds P

EST sequences (10 of 126) [Show all sequences]

AI496996.1 Clone IMAGE:3715649 mixed 5' read P
AI497463.1 Clone IMAGE:3715649 mixed 3' read A
AI558752.1 Clone IMAGE:3718170 mixed 5' read P
AI658082.1 Clone IMAGE:3721321 mixed 5' read P
AI793828.1 Clone IMAGE:3725223 mixed 3' read A
AI794645.1 Clone IMAGE:3724481 mixed 5' read P
AI877880.1 Clone IMAGE:3725223 mixed 5' read
AI883938.1 Clone IMAGE:3724481 mixed 3' read A
AI943304.1 Clone IMAGE:3727511 mixed 5' read P
AW059267.1 Clone IMAGE:3738685 mixed 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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