NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:43467     UniGene Cel.630     Caenorhabditis elegans (nematode)   nhr-14
Protein NHR-14 (nhr-14)

Nematode protein-coding gene nhr-14. Represented by 25 ESTs from 6 cDNA libraries. EST representation biased toward L1 larva. Corresponds to 2 reference sequences (different isoforms). [UniGene 43467 - Cel.630]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_741860.2 Protein NHR-14, isoform a C. elegans 100.0 434
NP_572346.1 ribosomal protein L17, isoform D D. melanogaster 65.3 150
NP_001086621.1 ribosomal protein L17 X. laevis 60.8 158
NP_001186269.1 60S ribosomal protein L17 isoform a H. sapiens 60.1 158
XP_001478961.1 PREDICTED: 60S ribosomal protein L17-like M. musculus 59.4 160
NP_001229966.1 60S ribosomal protein L17 D. rerio 58.9 158
NP_176910.1 60S ribosomal protein L17-2 A. thaliana 57.7 156
XP_961479.2 60S ribosomal protein L17 N. crassa 55.1 147
XP_001693454.1 ribosomal protein L17, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 46.3 147
NP_012358.1 Rpl17bp S. cerevisiae 45.2 155
Other hits (2 of 59) [Show all]SpeciesId(%)Len(aa)
XP_001607573.1 PREDICTED: 60S ribosomal protein L17-like N. vitripennis 66.0 150
XP_003435844.1 AGAP001459-PB A. gambiae 64.6 158

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: L1 larva [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: L1 larva; mixed; L4 larva
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AF083229.1 Caenorhabditis elegans nuclear receptor NHR-14 (nhr-14) mRNA, partial cds PA
NM_171743.3 Caenorhabditis elegans Protein NHR-14, isoform b (nhr-14) mRNA, complete cds
NM_171742.3 Caenorhabditis elegans Protein NHR-14, isoform a (nhr-14) mRNA, complete cds

EST sequences (10 of 25) [Show all sequences]

CB399397.1 mixed P
CB402858.1 mixed P
BJ766952.1 Clone yk1652h09 mixed 5' read P
BJ791422.1 Clone yk1652h09 mixed 3' read
BJ801891.1 Clone yk1454g01 L4 larva 5' read P
Z14553.1 Clone cm15g5 mixed 5' read P
Z14561.1 Clone cm15h3 mixed 5' read P
Z14562.1 Clone cm15h4 mixed 5' read P
FN873448.1 Clone abi3100_cex_20040111.A04_11652820_SL1_3_040111.f P
FN873449.1 Clone abi3100_cex_20040111.A04_11652820_SL1_3_040111.r P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help