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UGID:30427     UniGene Bt.516     Bos taurus (cow)   GJB1
Gap junction protein, beta 1, 32kDa (GJB1)

Cow protein-coding gene GJB1. Represented by 80 ESTs from 21 cDNA libraries. Corresponds to reference sequence NM_174069.2. [UniGene 30427 - Bt.516]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_776494.1 gap junction beta-1 protein B. taurus 100.0 283
XP_003135210.1 PREDICTED: gap junction beta-1 protein-like isoform 1 S. scrofa 99.7 283
XP_538073.1 PREDICTED: gap junction beta-1 protein isoform 1 C. lupus familiaris 99.7 282
NP_032150.2 gap junction beta-1 protein M. musculus 98.9 282
NP_001091111.1 gap junction beta-1 protein H. sapiens 98.9 282
NP_001095219.1 gap junction beta-1 protein X. laevis 81.3 262
XP_001921623.3 PREDICTED: gap junction beta-1 protein-like D. rerio 75.0 280
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
NP_001075360.1 gap junction beta-1 protein E. caballus 99.3 282
NP_058947.1 gap junction beta-1 protein R. norvegicus 98.9 282

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: kidney; reticulum; brain; intestine; mixed; abomasum; testis; whole body; embryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22
UniSTS entry: GJB1
UniSTS entry: RH1704
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

X95311.1 B.taurus mRNA for gap junction protein PA
NM_174069.2 Bos taurus gap junction protein, beta 1, 32kDa (GJB1), mRNA PA
AJ224440.1 Bos taurus mRNA for connexin 32, partial
BC111646.1 Bos taurus gap junction protein, beta 1, 32kDa, mRNA (cDNA clone MGC:137511 IMAGE:8020775), complete cds P

EST sequences (10 of 80) [Show all sequences]

AV606632.1 Clone E1KI036A09 kidney 3' read
AV606633.1 Clone E1KI036A09 kidney 5' read P
BE722278.1 mixed 5' read P
AU275253.1 Clone fetus01B01 whole body 3' read A
CK847158.1 mixed 3' read A
CK955078.1 Clone 10BOV34_C12 intestine 3' read A
CK955591.1 Clone 10BOV34_C12 intestine 5' read P
CK960696.1 Clone 10BOV8_D04 intestine 5' read
CK964850.1 Clone 9BOV18_N12 abomasum 3' read A
CK965153.1 Clone 9BOV18_N12 abomasum 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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