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Paramecium tetraurelia: UniGene Build #8

Lineage: cellular organisms; Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia

Sequences Included in UniGene
Known genes are from GenBank 07 Jan 2011
ESTs are from dbEST through 07 Jan 2011

70 mRNAs
4,881 Models
0 HTC
2,450 EST, 3'reads
62,836 EST, 5'reads
2 EST, other/unknown

70,239 total sequences in clusters

Build Method: Transcript Based

Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
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Final Number of Clusters (sets)

5,230 sets total
66 sets contain at least one mRNA
0 sets contain at least one HTC sequence
5,204 sets contain at least one EST
40 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Pte build 8
Cluster size Number of clusters

1025-2048 1
513-1024 1
257-512 16
129-256 27
65-128 105
33-64 234
17-32 507
9-16 949
5-8 1785
3-4 1406
2 107
1 92



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