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Rattus norvegicus: UniGene Build #195

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus; Rattus norvegicus

Sequences Included in UniGene
Known genes are from GenBank 23 Mar 2013
ESTs are from dbEST through 23 Mar 2013

65,306 mRNAs
372 Models
687 HTC
379,760 EST, 3'reads
480,514 EST, 5'reads
78,268 EST, other/unknown

1,004,907 total sequences in clusters

Build Method: Genome Based

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

67,297 sets total
21,428 sets contain at least one mRNA
643 sets contain at least one HTC sequence
63,455 sets contain at least one EST
17,610 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Rn build 195
Cluster size Number of clusters

8193-16384 1
4097-8192 2
2049-4096 7
1025-2048 16
513-1024 60
257-512 218
129-256 840
65-128 2393
33-64 4428
17-32 4695
9-16 4701
5-8 5326
3-4 6516
2 5953
1 32141




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