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Sequence Set Browser

 

NZ_AAZT00000000.1 Ureaplasma urealyticum serovar 12 str. ATCC 33696

Master
# of Scaffolds/Chrs: 5
BioProject: PRJNA224116
BioSample: SAMN02435858
Assembly: GCF_000169955.1
Keywords: WGS
Annotation: Scaffolds
Organism: Ureaplasma urealyticum serovar 12 str. ATCC 33696show lineagehide lineage
Biosource:
/mol_type = genomic genomic
/serovar = 12
/strain = ATCC 33696
WGS: AAZT01000001:AAZT01000005
Scaffolds: NZ_AAZT01000001:NZ_AAZT01000005
5 scaffolds, 642 proteins, total length is 844,514 bases
Reference:
Genome sequence of Ureaplasma urealyticum serovar 12 str. ATCC 33696 : Unpublished – Methe,B.A., Glass,J., White,K., Shrivastava,S.
Submission:
Submitted (23-APR-2007) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA – Methe,B.A.
Submission:
Submitted (31-JUL-2008) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA – Methe,B.A., Glass,J., White,K., Shrivastava,S.

The Ureaplasma urealyticum serovar 12 str. ATCC 33696 whole genome shotgun (WGS) project has the project accession NZ_AAZT00000000. This version of the project (01) has the accession number NZ_AAZT01000000, and consists of sequences AAZT01000001-AAZT01000005.

Annotation was added to the contigs in August 2008.

##Genome-Annotation-Data-START##
Annotation Provider : NCBI
Annotation Date : 11/15/2017 10:23:26
Annotation Pipeline : NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method : Best-placed reference protein set; GeneMarkS+
Annotation Software revision : 4.3
Features Annotated : Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total) : 697
CDS (total) : 655
Genes (coding) : 638
CDS (coding) : 638
Genes (RNA) : 42
rRNAs : 3, 3, 3 ( 5S, 16S, 23S )
complete rRNAs : 3, 3, 3 ( 5S, 16S, 23S )
partial rRNAs :
tRNAs : 30
ncRNAs : 3
Pseudo Genes (total) : 17
Pseudo Genes (ambiguous residues) : 0 of 17
Pseudo Genes (frameshifted) : 8 of 17
Pseudo Genes (incomplete) : 9 of 17
Pseudo Genes (internal stop) : 2 of 17
Pseudo Genes (multiple problems) : 2 of 17
##Genome-Annotation-Data-END##