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Sequence Set Browser

 

JXLN00000000.1 Sarcoptes scabiei

Master
# of Contigs: 18,860
# of Proteins: 10,473
# of Scaffolds/Chrs: 1
Total length: 56,262,437 bp
BioProject: PRJNA268368
BioSample: SAMN03218485
Keywords: WGS
Annotation: Contigs
Organism: Sarcoptes scabieishow lineagehide lineage
Biosource:
/collection_date = 17-Jul-2014
/host = Canis lupus familiaris
/isolate = Arlian Lab
/mol_type = genomic
WGS: JXLN01000001:JXLN01018860
Scaffolds: CM003133:CM003133
1 scaffold, total length is 13,667 bases
Reference:
Draft genome of the scabies mite : Parasit Vectors 8 (1), 585 (2015) – Rider,S.D. Jr., Morgan,M.S., Arlian,L.G.
Submission:
Submitted (14-JAN-2015) Biological Sciences, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH 45435, USA – Arlian,L.G., Morgan,M.S., Vyszenski-Moher,D.L., Rider,S.D. Jr.
Submission:
Submitted (02-OCT-2015) Biological Sciences, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH 45435, USA – Arlian,L.G., Morgan,M.S., Vyszenski-Moher,D.L., Rider,S.D. Jr.

The Sarcoptes scabiei whole genome shotgun (WGS) project has the project accession JXLN00000000. This version of the project (01) has the accession number JXLN01000000, and consists of sequences JXLN01000001-JXLN01018860.

Annotation was added to the sequences in October 2015.

##Genome-Assembly-Data-START##
Assembly Date : 16-SEP-2014
Assembly Method : Minia v. 1.6088; SSPACE Standard v. 3.0
Assembly Name : SarSca1.0
Genome Representation : Full
Expected Final Version : No
Genome Coverage : 174.0x
Sequencing Technology : Illumina
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:JXLN01.1.gbff.gz 29.1 Mb
FASTA:JXLN01.1.fsa_nt.gz 16.3 Mb
ASN.1:JXLN01.1.bbs.gz 18.2 Mb