Sign in to NCBI
skip to main content

Sequence Set Browser

 

JLPE00000000.1 Mycobacterium tuberculosis UT0059

Master
# of Contigs: 20
# of Proteins: 4,019
# of Scaffolds: 9
Total length: 4,397,645 bp
BioProject: PRJNA223569
BioSample: SAMN02381014
Keywords: WGS
Annotation: Contigs
Organism: Mycobacterium tuberculosis UT0059show lineagehide lineage
Biosource:
/country = Uganda
/host = Homo sapiens
/isolation_source = Sputum
/mol_type = genomic
/strain = UT0059
WGS: JLPE01000001:JLPE01000020
Scaffolds: KK339964:KK339972
9 scaffolds, total length is 4,401,378 bases
Reference:
The Genome Sequence of Mycobacterium tuberculosis UT0059 : Unpublished – show 37 authorshide authors
Earl,A.M., Alland,D., Armstrong,D., Kyobe,S., Weir,S., Ssengooba,W., Lee,J.S., Dorman,S., Desjardins,C., Abeel,T., Young,S., Zeng,Q., Gargeya,S., Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J., Murphy,C., Naylor,J., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genomics Platform, The Broad Institute Genome Sequencing Center for Infectious Disease
Submission:
Submitted (08-APR-2014) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 37 authorshide authors
Earl,A.M., Alland,D., Armstrong,D., Kyobe,S., Weir,S., Ssengooba,W., Lee,J.S., Dorman,S., Desjardins,C., Abeel,T., Young,S., Zeng,Q., Gargeya,S., Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J., Murphy,C., Naylor,J., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genomics Platform, The Broad Institute Genome Sequencing Center for Infectious Disease

The Mycobacterium tuberculosis UT0059 whole genome shotgun (WGS) project has the project accession JLPE00000000. This version of the project (01) has the accession number JLPE01000000, and consists of sequences JLPE01000001-JLPE01000020.

Please be aware that the annotation is done automatically with little or no manual curation.

##Genome-Assembly-Data-START##
Assembly Method : allpaths v. R48294
Assembly Name : Myco_tube_UT0059_V1
Genome Coverage : 122.0x
Sequencing Technology : Illumina
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:JLPE01.1.gbff.gz 2.8 Mb
FASTA:JLPE01.1.fsa_nt.gz 1.3 Mb
ASN.1:JLPE01.1.bbs.gz 2.2 Mb