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Sequence Set Browser

 

CAKH00000000.1 Chondrus crispus

Master
# of Contigs: 3,241
# of Proteins: 9,603
# of Scaffolds/Chrs: 925
Total length: 103,905,190 bp
BioProject: PRJEA78309
BioSample: SAMEA2272275
Keywords: WGS
Annotation: Scaffolds
Organism: Chondrus crispusshow lineagehide lineage
Biosource:
/mol_type = genomic
/strain = Stackhouse
WGS: CAKH01000001:CAKH01003241
Scaffolds: HG001459:HG002383
925 scaffolds, 9,603 proteins, total length is 104,800,334 bases
Reference:
Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida : Proc. Natl. Acad. Sci. U.S.A. 110 (13), 5247-5252 (2013) – show 58 authorshide authors
Collen,J., Porcel,B., Carre,W., Ball,S.G., Chaparro,C., Tonon,T., Barbeyron,T., Michel,G., Noel,B., Valentin,K., Elias,M., Artiguenave,F., Arun,A., Aury,J.M., Barbosa-Neto,J.F., Bothwell,J.H., Bouget,F.Y., Brillet,L., Cabello-Hurtado,F., Capella-Gutierrez,S., Charrier,B., Cladiere,L., Cock,J.M., Coelho,S.M., Colleoni,C., Czjzek,M., Da Silva,C., Delage,L., Denoeud,F., Deschamps,P., Dittami,S.M., Gabaldon,T., Gachon,C.M., Groisillier,A., Herve,C., Jabbari,K., Katinka,M., Kloareg,B., Kowalczyk,N., Labadie,K., Leblanc,C., Lopez,P.J., McLachlan,D.H., Meslet-Cladiere,L., Moustafa,A., Nehr,Z., Nyvall Collen,P., Panaud,O., Partensky,F., Poulain,J., Rensing,S.A., Rousvoal,S., Samson,G., Symeonidi,A., Weissenbach,J., Zambounis,A., Wincker,P., Boyen,C.
Submission:
Submitted (28-AUG-2012) Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr) – Genoscope -,C.E.A.

The Chondrus crispus whole genome shotgun (WGS) project has the project accession CAKH00000000. This version of the project (01) has the accession number CAKH01000000, and consists of sequences CAKH01000001-CAKH01003241.

Contigs
Download
GenBank:CAKH01.1.gbff.gz 44.1 Mb
FASTA:CAKH01.1.fsa_nt.gz 30.5 Mb
ASN.1:CAKH01.1.bbs.gz 24.4 Mb