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Sequence Set Browser

 

CABK00000000.1 Dicentrarchus labrax

Master
# of Contigs: 36,166
# of Proteins: 0
Total length: 98,228,070 bp
BioProject: PRJEA39865
BioSample: SAMEA2272176
Keywords: WGS
Organism: Dicentrarchus labraxshow lineagehide lineage
Biosource:
/mol_type = genomic
/sex = male
WGS: CABK01000001:CABK01036166
Reference:
The European sea bass Dicentrarchus labrax genome puzzle: comparative BAC-mapping and low coverage shotgun sequencing : Unpublished – show 6 authorshide authors
Kuhl,H., Beck,A., Wozniak,G., Canario,A.V.M., Volckaert,F.A.M., Reinhardt,R.
Submission:
Submitted (10-AUG-2009) Beck A., proScience, MPI for Molecular Genetics, Ihnestrasse 73, D-14195 Berlin, GERMANY – Beck,A.

The Dicentrarchus labrax whole genome shotgun (WGS) project has the project accession CABK00000000. This version of the project (01) has the accession number CABK01000000, and consists of sequences CABK01000001-CABK01036166.

Whole Genome Shotgun assembly made using CELERA Assembler by H. Kuhl, using 102960 BAC end sequences from bassbac clone library (constructed by Whitaker et al.) and 2092161 plasmid shotgun sequences . The submitted contigs represent 16% of the estimated 600mb genome. The average sequencing coverage of the contigs by shotgun reads was 2x.

Contigs
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GenBank:CABK01.1.gbff.gz 41 Mb
FASTA:CABK01.1.fsa_nt.gz 29.5 Mb
ASN.1:CABK01.1.bbs.gz 24.6 Mb