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Sequence Set Browser

 

AXBW00000000.1 Marinobacter sp. C1S70

Master
# of Contigs: 105
# of Proteins: 3,825
Total length: 4,126,405 bp
BioProject: PRJNA217943
BioSample: SAMN02345632
Keywords: WGS
Annotation: Contigs
Organism: Marinobacter sp. C1S70show lineagehide lineage
Biosource:
/country = USA
/isolation_source = oil-contaminated beach sediments
/mol_type = genomic
/strain = C1S70
WGS: AXBW01000001:AXBW01000105
Reference:
Draft genome sequences for oil-degrading bacterial strains from beach sands impacted by the deepwater horizon oil spill : Genome Announc 1 (6), e01015-13 (2013) – show 6 authorshide authors
Overholt,W.A., Green,S.J., Marks,K.P., Venkatraman,R., Prakash,O., Kostka,J.E.
Submission:
Submitted (17-SEP-2013) DNA Services, University of Illinois, 835 S. Wolcott Avenue, A310 CMWT, Chicago, IL 60607, USA – Green,S.

The Marinobacter sp. C1S70 whole genome shotgun (WGS) project has the project accession AXBW00000000. This version of the project (01) has the accession number AXBW01000000, and consists of sequences AXBW01000001-AXBW01000105.

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

##Genome-Annotation-Data-START##
Annotation Provider : NCBI
Annotation Date : 09/27/2013 10:00:00
Annotation Pipeline : NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method : Best-placed reference protein set; GeneMarkS+
Annotation Software revision : 2.1 (rev. 411575)
Features Annotated : Gene; CDS; rRNA; tRNA; repeat_region
Genes : 3,875
CDS : 3,825
Pseudo Genes : 1
CRISPR Arrays : 3
rRNAs : 3 ( 5S, 16S, 23S )
tRNAs : 46
Frameshifted Genes : 1
##Genome-Annotation-Data-END##
##Genome-Assembly-Data-START##
Assembly Method : CLC NGS Cell v. 6.1
Genome Coverage : 100.0x
Sequencing Technology : IonTorrent
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:AXBW01.1.gbff.gz 2.8 Mb
FASTA:AXBW01.1.fsa_nt.gz 1.2 Mb
ASN.1:AXBW01.1.bbs.gz 2.4 Mb