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Sequence Set Browser


AWPM00000000.1 Escherichia coli M1

# of Contigs: 732
# of Proteins: 0
# of Scaffolds: 99
Total length: 5,183,430 bp
BioProject: PRJNA215830
BioSample: SAMN02335229
Keywords: WGS
Organism: Escherichia coli M1show lineagehide lineage
/mol_type = genomic
/strain = M1
WGS: AWPM01000001:AWPM01000732
Scaffolds: KE999683:KE999781
99 scaffolds, total length is 1,678,770 bases
Precise Dissection of an Escherichia coli O157:H7 outbreak by Single Nucleotide Polymorphism Analysis : J. Clin. Microbiol. (2013) In press – show 11 authorshide authors
Turabelidze,G., Lawrence,S.J., Gao,H., Sodergren,E., Weinstock,G., Abubucker,S., Wylie,T., Mitreva,M., Shaikh,N., Gautom,R., Tarr,P.I.
Submitted (03-SEP-2013) The Genome Institute, Washington University School of Medicine, 4444 Forest Park, St. Louis, MO 63108, USA – show 16 authorshide authors
Weinstock,G., Sodergren,E., Wollam,A., Fulton,L., Fulton,R., O'Laughlin,M., Fronick,C., Godfrey,J., Cordes,M., Miner,T., Appelbaum,E., Herter,B., Wylie,T., Lek,S., Mitreva,M., Wilson,R.K.

The Escherichia coli M1 whole genome shotgun (WGS) project has the project accession AWPM00000000. This version of the project (01) has the accession number AWPM01000000, and consists of sequences AWPM01000001-AWPM01000732.

Assembly Method : Velvet v. April 2012
Assembly Name : E_coliM1-1.0
Genome Coverage : 82x
Sequencing Technology : Illumina
GenBank:AWPM01.1.gbff.gz 2.2 Mb
FASTA:AWPM01.1.fsa_nt.gz 1.5 Mb
ASN.1:AWPM01.1.bbs.gz 1.2 Mb